Variant report

Variant rs12635271
Chromosome Location chr3:50251270-50251271
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50244000-50254600 Weak transcription Esophagus oesophagus
2 chr3:50244000-50263800 Weak transcription Right Atrium heart
3 chr3:50244200-50263800 Weak transcription Left Ventricle heart
4 chr3:50244400-50263800 Weak transcription Right Ventricle heart
5 chr3:50246800-50251400 Enhancers Skeletal Muscle Male skeletal muscle
6 chr3:50247400-50264400 Weak transcription Ovary ovary
7 chr3:50248200-50253000 Enhancers Brain Hippocampus Middle brain
8 chr3:50248400-50255200 Weak transcription Spleen Spleen
9 chr3:50249000-50251400 Enhancers Liver Liver
10 chr3:50249000-50259000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr3:50249200-50251600 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr3:50249200-50252800 Enhancers Brain Anterior Caudate brain
13 chr3:50249400-50251600 Enhancers Cortex derived primary cultured neurospheres brain
14 chr3:50249400-50251800 Enhancers Brain Angular Gyrus brain
15 chr3:50249400-50252400 Enhancers Brain Substantia Nigra brain
16 chr3:50249400-50252600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
17 chr3:50249600-50251800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr3:50249600-50252800 Enhancers Brain Inferior Temporal Lobe brain
19 chr3:50249600-50253800 Enhancers Skeletal Muscle Female skeletal muscle
20 chr3:50249800-50255000 Weak transcription HMEC breast
21 chr3:50250000-50252000 Genic enhancers HepG2 liver
22 chr3:50250000-50253000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr3:50250000-50256400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr3:50250200-50251400 Enhancers Brain Germinal Matrix brain
25 chr3:50250200-50255400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr3:50250400-50252200 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr3:50250600-50251600 Weak transcription Psoas Muscle Psoas
28 chr3:50250600-50251800 Enhancers Fetal Brain Female brain
29 chr3:50250600-50255800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr3:50250800-50252400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr3:50251000-50251400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
32 chr3:50251200-50251400 Flanking Active TSS Brain Cingulate Gyrus brain
33 chr3:50251200-50252400 Weak transcription Fetal Muscle Leg muscle
34 chr3:50251200-50253000 Genic enhancers Pancreas Pancrea

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