The 2.0 version of rSNPBase

Variant report

Variant rs12640612
Chromosome Location chr4:26442303-26442304
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:26414600-26443000 Weak transcription Fetal Brain Male brain
2 chr4:26417200-26443600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr4:26423000-26442600 Weak transcription Fetal Heart heart
4 chr4:26423200-26446000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr4:26423400-26459200 Weak transcription Thymus Thymus
6 chr4:26425600-26442600 Weak transcription Stomach Mucosa stomach
7 chr4:26428800-26442600 Weak transcription Pancreas Pancrea
8 chr4:26429000-26442800 Weak transcription Psoas Muscle Psoas
9 chr4:26431800-26444400 Weak transcription Gastric stomach
10 chr4:26431800-26445200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr4:26432400-26443400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr4:26432600-26442600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr4:26432600-26442600 Weak transcription Brain Anterior Caudate brain
14 chr4:26432600-26442800 Weak transcription Esophagus oesophagus
15 chr4:26432600-26442800 Weak transcription Right Ventricle heart
16 chr4:26432600-26444600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr4:26432600-26445600 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr4:26433600-26444200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr4:26433800-26444200 Weak transcription HepG2 liver
20 chr4:26434400-26442600 Weak transcription Brain Inferior Temporal Lobe brain
21 chr4:26434400-26443200 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr4:26434600-26442800 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr4:26434800-26442600 Weak transcription Left Ventricle heart
24 chr4:26434800-26442800 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr4:26435000-26442800 Weak transcription Duodenum Mucosa Duodenum
26 chr4:26436200-26442600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr4:26436200-26446000 Weak transcription H1 Cell Line embryonic stem cell
28 chr4:26436400-26442400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr4:26436400-26442600 Weak transcription Brain Angular Gyrus brain
30 chr4:26436400-26442600 Weak transcription Brain Substantia Nigra brain
31 chr4:26436400-26445800 Weak transcription Brain Cingulate Gyrus brain
32 chr4:26436400-26456400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr4:26438000-26442400 Weak transcription Ovary ovary
34 chr4:26438400-26442600 Weak transcription Rectal Smooth Muscle rectum
35 chr4:26438400-26443000 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr4:26438800-26442400 Weak transcription HSMMtube muscle
37 chr4:26439200-26442400 Weak transcription Brain Hippocampus Middle brain
38 chr4:26439200-26443200 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr4:26439600-26444200 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr4:26439800-26445400 Weak transcription Fetal Thymus thymus
41 chr4:26440200-26442600 Weak transcription Primary T cells from cord blood blood
42 chr4:26440200-26443400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr4:26440200-26444200 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr4:26440200-26444400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr4:26440200-26444600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr4:26440200-26445200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr4:26440400-26442600 Weak transcription Adipose Nuclei Adipose
48 chr4:26440400-26442600 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr4:26440400-26443200 Weak transcription H9 Cell Line embryonic stem cell
50 chr4:26440400-26443400 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015