Variant report

Variant rs12642238
Chromosome Location chr4:47606567-47606568
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:47575000-47610200 Weak transcription Fetal Brain Male brain
2 chr4:47593400-47608200 Weak transcription Esophagus oesophagus
3 chr4:47593400-47614200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr4:47594200-47607000 Weak transcription Brain Inferior Temporal Lobe brain
5 chr4:47594200-47608000 Weak transcription Brain Anterior Caudate brain
6 chr4:47594200-47610200 Weak transcription Ovary ovary
7 chr4:47594200-47614400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr4:47594200-47614600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr4:47594400-47607000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr4:47594400-47607400 Weak transcription HSMMtube muscle
11 chr4:47594800-47606800 Weak transcription Primary B cells from cord blood blood
12 chr4:47595000-47607000 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr4:47595800-47614400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr4:47598200-47614200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr4:47600800-47606600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr4:47601800-47641000 Weak transcription Fetal Heart heart
17 chr4:47602400-47614600 Weak transcription Aorta Aorta
18 chr4:47605400-47607200 Strong transcription HSMM muscle
19 chr4:47605400-47607400 Strong transcription Placenta Placenta
20 chr4:47605600-47607000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr4:47605600-47610400 Weak transcription Right Ventricle heart
22 chr4:47605600-47616200 Weak transcription Left Ventricle heart
23 chr4:47605600-47616400 Weak transcription Brain Substantia Nigra brain
24 chr4:47605600-47627000 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr4:47605800-47614000 Weak transcription Muscle Satellite Cultured Cells --
26 chr4:47606200-47608400 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr4:47606400-47606600 ZNF genes & repeats Liver Liver
28 chr4:47606400-47608800 Weak transcription Stomach Smooth Muscle stomach

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