The 2.0 version of rSNPBase

Variant report

Variant rs12643640
Chromosome Location chr4:736626-736627
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:702200-754800 Weak transcription Hela-S3 cervix
2 chr4:715600-750200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr4:720000-738400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr4:720800-738400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr4:721000-738600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr4:721000-743600 Weak transcription Right Atrium heart
7 chr4:723600-738600 Strong transcription Brain Germinal Matrix brain
8 chr4:723800-737600 Strong transcription Dnd41 blood
9 chr4:723800-738400 Strong transcription Cortex derived primary cultured neurospheres brain
10 chr4:724200-738600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr4:724200-738600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr4:725200-738400 Strong transcription Thymus Thymus
13 chr4:725200-738600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr4:725200-738600 Strong transcription Fetal Stomach stomach
15 chr4:725800-738400 Strong transcription Primary hematopoietic stem cells short term culture blood
16 chr4:725800-738600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr4:726200-738400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr4:726200-738400 Strong transcription Placenta Amnion Placenta Amnion
19 chr4:726200-738600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr4:727000-767600 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr4:727200-738200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr4:728000-741800 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr4:728600-755800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr4:728600-763400 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr4:729000-742400 Weak transcription Small Intestine intestine
26 chr4:729000-754600 Weak transcription Fetal Kidney kidney
27 chr4:729000-762600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr4:729600-753800 Weak transcription Psoas Muscle Psoas
29 chr4:729600-760800 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr4:729800-738400 Strong transcription Fetal Adrenal Gland Adrenal Gland
31 chr4:729800-741600 Weak transcription Rectal Smooth Muscle rectum
32 chr4:732000-737400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr4:732000-742400 Weak transcription NHDF-Ad bronchial
34 chr4:732000-745200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr4:732200-741800 Weak transcription K562 blood
36 chr4:732200-743600 Weak transcription HMEC breast
37 chr4:733400-738400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr4:733600-737200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr4:733600-738400 Strong transcription Fetal Intestine Small intestine
40 chr4:733600-741600 Weak transcription Brain Angular Gyrus brain
41 chr4:733600-741600 Weak transcription GM12878-XiMat blood
42 chr4:733600-742600 Weak transcription Stomach Mucosa stomach
43 chr4:733600-753800 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr4:733800-747400 Weak transcription Primary B cells from cord blood blood
45 chr4:734000-741600 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr4:734000-744000 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr4:734000-745400 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr4:734200-741800 Weak transcription Colon Smooth Muscle Colon
49 chr4:734200-744800 Weak transcription Brain Cingulate Gyrus brain
50 chr4:734400-741400 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015