Variant report
| Variant | rs12645662 |
|---|---|
| Chromosome Location | chr3:56635781-56635782 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:56592400-56639800 | Weak transcription | Right Ventricle | heart |
| 2 | chr3:56592400-56644800 | Weak transcription | Small Intestine | intestine |
| 3 | chr3:56592800-56644600 | Weak transcription | Fetal Heart | heart |
| 4 | chr3:56600600-56640000 | Weak transcription | NHLF | lung |
| 5 | chr3:56603200-56650400 | Weak transcription | K562 | blood |
| 6 | chr3:56603600-56640000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 7 | chr3:56605600-56639600 | Weak transcription | Pancreas | Pancrea |
| 8 | chr3:56605800-56639400 | Weak transcription | Spleen | Spleen |
| 9 | chr3:56605800-56639600 | Weak transcription | Esophagus | oesophagus |
| 10 | chr3:56606200-56650200 | Weak transcription | Colonic Mucosa | Colon |
| 11 | chr3:56607800-56639800 | Weak transcription | HSMMtube | muscle |
| 12 | chr3:56607800-56650200 | Weak transcription | Psoas Muscle | Psoas |
| 13 | chr3:56609400-56638600 | Weak transcription | Brain Hippocampus Middle | brain |
| 14 | chr3:56616400-56639400 | Weak transcription | Lung | lung |
| 15 | chr3:56617200-56639200 | Weak transcription | Thymus | Thymus |
| 16 | chr3:56617200-56639600 | Weak transcription | Aorta | Aorta |
| 17 | chr3:56617400-56639800 | Weak transcription | Colon Smooth Muscle | Colon |
| 18 | chr3:56617400-56639800 | Weak transcription | Dnd41 | blood |
| 19 | chr3:56619200-56639600 | Weak transcription | Gastric | stomach |
| 20 | chr3:56619200-56639800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 21 | chr3:56623000-56639600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 22 | chr3:56624800-56639600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 23 | chr3:56624800-56639800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 24 | chr3:56625200-56639600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 25 | chr3:56625200-56639600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 26 | chr3:56625200-56639600 | Weak transcription | HMEC | breast |
| 27 | chr3:56625200-56640000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 28 | chr3:56625200-56640000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 29 | chr3:56625200-56650400 | Weak transcription | NHEK | skin |
| 30 | chr3:56625200-56653400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 31 | chr3:56625600-56639600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 32 | chr3:56626400-56656200 | Weak transcription | Stomach Mucosa | stomach |
| 33 | chr3:56627600-56639600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 34 | chr3:56627800-56639800 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 35 | chr3:56627800-56640000 | Weak transcription | GM12878-XiMat | blood |
| 36 | chr3:56628000-56638800 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 37 | chr3:56628200-56639600 | Weak transcription | Brain Angular Gyrus | brain |
| 38 | chr3:56628200-56640000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 39 | chr3:56628400-56639600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 40 | chr3:56628400-56639800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 41 | chr3:56628400-56640000 | Weak transcription | Brain Anterior Caudate | brain |
| 42 | chr3:56628400-56640200 | Weak transcription | Osteobl | bone |
| 43 | chr3:56628600-56640000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 44 | chr3:56628600-56649600 | Weak transcription | HepG2 | liver |
| 45 | chr3:56629000-56639000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 46 | chr3:56629000-56647400 | Weak transcription | HUVEC | blood vessel |
| 47 | chr3:56629000-56648000 | Weak transcription | NH-A | brain |
| 48 | chr3:56629600-56640000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 49 | chr3:56629600-56640000 | Weak transcription | Primary B cells from peripheral blood | blood |
| 50 | chr3:56629600-56648200 | Weak transcription | NHDF-Ad | bronchial |
