Variant report

Variant rs12654557
Chromosome Location chr5:106928572-106928573
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:106913600-106928800 Weak transcription Right Ventricle heart
2 chr5:106915200-106929800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr5:106917000-106929200 Weak transcription HMEC breast
4 chr5:106917800-106928600 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr5:106925000-106928600 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr5:106926000-106928600 Weak transcription Fetal Stomach stomach
7 chr5:106926000-106931400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr5:106926000-106941000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr5:106926400-106928800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr5:106926800-106930000 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr5:106927200-106930000 Weak transcription Esophagus oesophagus
12 chr5:106927800-106930000 Weak transcription Stomach Mucosa stomach
13 chr5:106928000-106928600 Enhancers GM12878-XiMat blood
14 chr5:106928000-106929200 Enhancers HSMMtube muscle
15 chr5:106928000-106930600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr5:106928000-106931200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr5:106928200-106928600 Enhancers HUES6 Cell Line embryonic stem cell
18 chr5:106928200-106928800 Enhancers Fetal Brain Male brain
19 chr5:106928200-106929000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr5:106928200-106929000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
21 chr5:106928200-106929000 Enhancers Brain Anterior Caudate brain
22 chr5:106928200-106929000 Enhancers Brain Substantia Nigra brain
23 chr5:106928200-106929200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
24 chr5:106928200-106929200 Enhancers Fetal Brain Female brain
25 chr5:106928200-106929400 Enhancers Brain Angular Gyrus brain
26 chr5:106928200-106929400 Genic enhancers A549 lung
27 chr5:106928200-106930200 Enhancers Brain Cingulate Gyrus brain
28 chr5:106928200-106930200 Enhancers Brain Inferior Temporal Lobe brain
29 chr5:106928200-106930200 Enhancers Fetal Muscle Leg muscle
30 chr5:106928200-106930600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
31 chr5:106928200-106930600 Enhancers Left Ventricle heart
32 chr5:106928200-106930800 Enhancers Fetal Heart heart
33 chr5:106928200-106931000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr5:106928400-106928600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr5:106928400-106928600 Enhancers HSMM muscle
36 chr5:106928400-106929000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr5:106928400-106929000 Enhancers HUES48 Cell Line embryonic stem cell
38 chr5:106928400-106929000 Active TSS Gastric stomach
39 chr5:106928400-106929200 Enhancers Right Atrium heart
40 chr5:106928400-106929600 Enhancers Aorta Aorta
41 chr5:106928400-106930600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
42 chr5:106928400-106930600 Enhancers Skeletal Muscle Female skeletal muscle
43 chr5:106928400-106930600 Enhancers NHDF-Ad bronchial

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