Variant report

Variant rs12658752
Chromosome Location chr5:52658884-52658885
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:52654200-52662800 Enhancers NHDF-Ad bronchial
2 chr5:52654600-52660600 Enhancers HSMM muscle
3 chr5:52654600-52660800 Enhancers Hela-S3 cervix
4 chr5:52654600-52660800 Enhancers HMEC breast
5 chr5:52654600-52662600 Enhancers Osteobl bone
6 chr5:52655000-52659800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr5:52655000-52662000 Enhancers NHEK skin
8 chr5:52655400-52661000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr5:52655600-52659200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr5:52656400-52659600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr5:52656600-52660000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr5:52656600-52662600 Enhancers HUVEC blood vessel
13 chr5:52657800-52659200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr5:52657800-52661000 Enhancers Muscle Satellite Cultured Cells --
15 chr5:52658200-52659200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr5:52658200-52660200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr5:52658400-52659200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr5:52658400-52659200 Weak transcription NH-A brain
19 chr5:52658600-52659000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr5:52658600-52659000 Active TSS A549 lung
21 chr5:52658600-52659000 Weak transcription NHLF lung
22 chr5:52658800-52659000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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