Variant report

Variant rs12661014
Chromosome Location chr6:161856132-161856133
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:161854600-161856200 Enhancers NHLF lung
2 chr6:161855000-161856800 Enhancers Fetal Stomach stomach
3 chr6:161855200-161856400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr6:161855200-161856400 Active TSS Breast Myoepithelial Primary Cells Breast
5 chr6:161855200-161856400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
6 chr6:161855200-161856400 Active TSS Skeletal Muscle Female skeletal muscle
7 chr6:161855200-161856600 Active TSS Psoas Muscle Psoas
8 chr6:161855200-161856800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr6:161855200-161856800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr6:161855200-161856800 Enhancers Fetal Lung lung
11 chr6:161855200-161856800 Enhancers NHEK skin
12 chr6:161855200-161857000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
13 chr6:161855200-161857800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr6:161855200-161858000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr6:161855400-161856200 Enhancers Left Ventricle heart
16 chr6:161855400-161856200 Enhancers Small Intestine intestine
17 chr6:161855400-161856400 Active TSS Aorta Aorta
18 chr6:161855400-161856400 Flanking Active TSS HSMMtube muscle
19 chr6:161855400-161856600 Flanking Active TSS Muscle Satellite Cultured Cells --
20 chr6:161855400-161856800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr6:161855400-161856800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr6:161855400-161856800 Enhancers Fetal Intestine Large intestine
23 chr6:161855400-161856800 Enhancers Fetal Kidney kidney
24 chr6:161855400-161856800 Enhancers Rectal Smooth Muscle rectum
25 chr6:161855400-161857000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr6:161855400-161857000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr6:161855400-161857000 Enhancers Fetal Muscle Leg muscle
28 chr6:161855600-161856400 Enhancers HUES48 Cell Line embryonic stem cell
29 chr6:161855600-161856600 Enhancers Brain Angular Gyrus brain
30 chr6:161855600-161856600 Weak transcription Fetal Muscle Trunk muscle
31 chr6:161855600-161856800 Enhancers Fetal Intestine Small intestine
32 chr6:161855600-161857000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr6:161855600-161857000 Enhancers HMEC breast
34 chr6:161855600-161857600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr6:161855600-161857600 Weak transcription Pancreas Pancrea
36 chr6:161855600-161864400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr6:161855800-161856200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr6:161855800-161856200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr6:161855800-161856200 Enhancers Brain Hippocampus Middle brain
40 chr6:161855800-161856200 Weak transcription Ovary ovary
41 chr6:161855800-161856200 Active TSS HSMM muscle
42 chr6:161855800-161856400 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr6:161855800-161856400 Active TSS Right Atrium heart
44 chr6:161855800-161856600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
45 chr6:161855800-161856800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr6:161855800-161856800 Enhancers Fetal Heart heart
47 chr6:161855800-161856800 Enhancers Osteobl bone
48 chr6:161855800-161857600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr6:161855800-161860200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr6:161856000-161856200 Enhancers Cortex derived primary cultured neurospheres brain

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