Variant report

Variant rs12661029
Chromosome Location chr6:74408159-74408160
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:74406600-74409200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr6:74406600-74412800 Active TSS Primary T helper cells PMA-I stimulated --
3 chr6:74406600-74414000 Weak transcription Placenta Placenta
4 chr6:74406800-74408400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr6:74406800-74408600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
6 chr6:74407000-74410000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
7 chr6:74407200-74408600 Transcr. at gene 5' and 3' HMEC breast
8 chr6:74407200-74408600 Transcr. at gene 5' and 3' NHDF-Ad bronchial
9 chr6:74407200-74413000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr6:74407200-74413600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr6:74407200-74414200 Weak transcription H9 Cell Line embryonic stem cell
12 chr6:74407200-74414200 Weak transcription Stomach Smooth Muscle stomach
13 chr6:74407200-74421800 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr6:74407200-74422400 Weak transcription Fetal Lung lung
15 chr6:74407200-74423800 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr6:74407200-74424800 Weak transcription Fetal Muscle Trunk muscle
17 chr6:74407400-74408800 Strong transcription HSMM muscle
18 chr6:74407400-74409800 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr6:74407400-74413000 Weak transcription NH-A brain
20 chr6:74407400-74414000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr6:74407400-74414400 Weak transcription Brain Anterior Caudate brain
22 chr6:74407400-74423000 Weak transcription Fetal Muscle Leg muscle
23 chr6:74407600-74409000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr6:74407600-74412000 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr6:74407600-74412800 Weak transcription NHLF lung
26 chr6:74407600-74413000 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr6:74407600-74413000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr6:74407600-74413000 Weak transcription Placenta Amnion Placenta Amnion
29 chr6:74407600-74413200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr6:74407600-74413600 Weak transcription Rectal Smooth Muscle rectum
31 chr6:74407600-74414000 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr6:74407600-74414000 Weak transcription Primary monocytes fromperipheralblood blood
33 chr6:74407600-74414000 Weak transcription Fetal Thymus thymus
34 chr6:74407600-74414000 Weak transcription Left Ventricle heart
35 chr6:74407600-74414000 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr6:74407600-74424000 Weak transcription Right Ventricle heart
37 chr6:74407800-74408400 Weak transcription A549 lung
38 chr6:74407800-74408400 Genic enhancers HUVEC blood vessel
39 chr6:74407800-74408800 Strong transcription Osteobl bone
40 chr6:74407800-74409200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr6:74407800-74409200 Weak transcription Colon Smooth Muscle Colon
42 chr6:74407800-74409400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr6:74407800-74410400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr6:74407800-74412600 Weak transcription Hela-S3 cervix
45 chr6:74407800-74412800 Weak transcription Fetal Heart heart
46 chr6:74407800-74413400 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr6:74407800-74415800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr6:74407800-74416800 Weak transcription Thymus Thymus
49 chr6:74408000-74408400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr6:74408000-74408400 Weak transcription NHEK skin

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