Variant report

Variant rs12667888
Chromosome Location chr7:100474289-100474290
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:100471400-100474800 Transcr. at gene 5' and 3' Dnd41 blood
2 chr7:100471800-100474400 Active TSS Pancreatic Islets Pancreatic Islet
3 chr7:100472000-100474400 Active TSS HSMMtube muscle
4 chr7:100473200-100474400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr7:100473200-100474400 Flanking Active TSS Adipose Nuclei Adipose
6 chr7:100473200-100474400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
7 chr7:100473200-100474600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
8 chr7:100473200-100474600 Flanking Active TSS Colon Smooth Muscle Colon
9 chr7:100473200-100474600 Transcr. at gene 5' and 3' Fetal Lung lung
10 chr7:100473200-100474800 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr7:100473400-100474400 Flanking Active TSS Duodenum Mucosa Duodenum
12 chr7:100473400-100474400 Flanking Active TSS Thymus Thymus
13 chr7:100473400-100474400 Flanking Active TSS HUVEC blood vessel
14 chr7:100473400-100474600 Transcr. at gene 5' and 3' Primary T killer memory cells from peripheral blood blood
15 chr7:100473400-100474600 Flanking Active TSS Brain Anterior Caudate brain
16 chr7:100473400-100474600 Transcr. at gene 5' and 3' NHEK skin
17 chr7:100473400-100474800 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
18 chr7:100473400-100474800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr7:100473400-100474800 Flanking Active TSS Duodenum Smooth Muscle Duodenum
20 chr7:100473600-100474400 Enhancers Primary monocytes fromperipheralblood blood
21 chr7:100473600-100474400 Enhancers Primary mononuclear cells fromperipheralblood Blood
22 chr7:100473600-100474400 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
23 chr7:100473600-100474400 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
24 chr7:100473600-100474400 Enhancers Sigmoid Colon Sigmoid Colon
25 chr7:100473600-100474400 Enhancers Spleen Spleen
26 chr7:100473600-100474600 Enhancers Pancreas Pancrea
27 chr7:100473600-100474600 Enhancers Stomach Mucosa stomach
28 chr7:100473600-100474600 Transcr. at gene 5' and 3' NH-A brain
29 chr7:100473600-100474800 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
30 chr7:100473600-100474800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
31 chr7:100473600-100474800 Enhancers Small Intestine intestine
32 chr7:100473600-100475800 Enhancers Fetal Brain Male brain
33 chr7:100473600-100477400 Weak transcription Aorta Aorta
34 chr7:100473600-100478000 Enhancers Primary T killer naive cells fromperipheralblood blood
35 chr7:100473600-100486600 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr7:100473800-100474400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr7:100473800-100474400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr7:100473800-100474400 Enhancers Gastric stomach
39 chr7:100473800-100474400 Enhancers Rectal Mucosa Donor 31 rectum
40 chr7:100473800-100474600 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
41 chr7:100473800-100474600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr7:100473800-100474600 Enhancers Primary neutrophils fromperipheralblood blood
43 chr7:100473800-100474600 Enhancers Primary hematopoietic stem cells blood
44 chr7:100473800-100474600 Enhancers Ovary ovary
45 chr7:100473800-100474800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr7:100473800-100474800 Flanking Active TSS HepG2 liver
47 chr7:100473800-100474800 Transcr. at gene 5' and 3' K562 blood
48 chr7:100473800-100475000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
49 chr7:100473800-100475000 Weak transcription Lung lung
50 chr7:100473800-100476400 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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