Variant report

Variant rs12668235
Chromosome Location chr7:5819195-5819196
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5762000-5820400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr7:5784000-5819600 Weak transcription Fetal Heart heart
3 chr7:5790800-5820400 Weak transcription Placenta Amnion Placenta Amnion
4 chr7:5792800-5820000 Weak transcription Fetal Kidney kidney
5 chr7:5792800-5820200 Weak transcription H1 Cell Line embryonic stem cell
6 chr7:5792800-5820200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr7:5792800-5820200 Weak transcription H9 Cell Line embryonic stem cell
8 chr7:5798800-5820400 Weak transcription Esophagus oesophagus
9 chr7:5799200-5819600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr7:5799200-5820200 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr7:5799600-5820200 Weak transcription Thymus Thymus
12 chr7:5800400-5819600 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr7:5800600-5819600 Weak transcription Liver Liver
14 chr7:5807000-5820400 Weak transcription Aorta Aorta
15 chr7:5807400-5819600 Weak transcription Brain Inferior Temporal Lobe brain
16 chr7:5807400-5819600 Weak transcription HSMMtube muscle
17 chr7:5808200-5820400 Weak transcription Gastric stomach
18 chr7:5811400-5820200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr7:5813000-5819200 Strong transcription Fetal Stomach stomach
20 chr7:5813400-5819200 Strong transcription Fetal Muscle Trunk muscle
21 chr7:5813400-5820400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr7:5813800-5819200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr7:5813800-5819200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr7:5814400-5819600 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr7:5814600-5820400 Enhancers Primary T helper naive cells from peripheral blood blood
26 chr7:5815000-5819400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr7:5815200-5819600 Weak transcription Muscle Satellite Cultured Cells --
28 chr7:5815600-5819600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr7:5815800-5819600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr7:5815800-5819600 Weak transcription Fetal Lung lung
31 chr7:5816400-5819200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr7:5816600-5819600 Genic enhancers Dnd41 blood
33 chr7:5816800-5820200 Weak transcription Fetal Intestine Small intestine
34 chr7:5817000-5819800 Enhancers Primary T helper cells fromperipheralblood blood
35 chr7:5817200-5819400 Weak transcription NHLF lung
36 chr7:5817200-5819600 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr7:5817200-5819600 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr7:5817200-5819600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr7:5817200-5819800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr7:5817200-5820000 Weak transcription Fetal Thymus thymus
41 chr7:5817200-5820200 Enhancers Primary T helper 17 cells PMA-I stimulated --
42 chr7:5817200-5820200 Weak transcription Lung lung
43 chr7:5817200-5820400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr7:5817400-5819400 Weak transcription NH-A brain
45 chr7:5817400-5819400 Weak transcription Osteobl bone
46 chr7:5817400-5819600 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr7:5817400-5819600 Weak transcription NHDF-Ad bronchial
48 chr7:5817600-5819600 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr7:5817600-5819600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr7:5817600-5819600 Weak transcription HSMM muscle

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