Variant report

(count:6 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOXA1	chr7:108169880-108170179	T-47D	breast:	n/a	n/a
2	POLR2A	chr7:108169704-108170212	H1-neurons	neurons:	n/a	n/a
3	IRF1	chr7:108169823-108170068	K562	blood:	n/a	n/a
4	FOXA1	chr7:108169937-108170152	T-47D	breast:	n/a	n/a
5	RCOR1	chr7:108169776-108170074	K562	blood:	n/a	n/a
6	TEAD4	chr7:108169751-108170186	H1-hESC	embryonic stem cell:	n/a	n/a

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:108159403..108171484-chr7:108200740..108214365,45	K562	blood:
2	chr7:108162967..108170259-chr7:108208242..108216228,25	MCF-7	breast:
3	chr7:108163122..108173185-chr7:108207236..108216619,40	K562	blood:

No data

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs73426173	1.00[AFR][1000 genomes]
rs9918603	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3348839	chr7:107377311-108286538	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	91 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs12673049	NRCAM	cis	lymphoblastoid	seeQTL

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:108167400-108173400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr7:108167600-108176200	Weak transcription	Primary B cells from cord blood	blood
3	chr7:108167800-108170400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr7:108168800-108175800	Weak transcription	K562	blood
5	chr7:108169600-108170200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr7:108169800-108170200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr7:108170000-108170200	Enhancers	H1 Cell Line	embryonic stem cell
8	chr7:108170000-108170200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr7:108170000-108170200	Enhancers	Pancreatic Islets	Pancreatic Islet
10	chr7:108170000-108170200	Enhancers	Sigmoid Colon	Sigmoid Colon
11	chr7:108170000-108170200	Enhancers	HMEC	breast
12	chr7:108170000-108170600	Enhancers	Placenta	Placenta

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