Variant report

Variant rs12675573
Chromosome Location chr8:8483293-8483294
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:8470200-8483400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr8:8476000-8484400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr8:8476200-8492600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr8:8476400-8497200 Weak transcription H9 Cell Line embryonic stem cell
5 chr8:8480400-8484600 Enhancers NHEK skin
6 chr8:8480400-8485600 Enhancers HMEC breast
7 chr8:8480600-8485600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr8:8482000-8486600 Enhancers HUVEC blood vessel
9 chr8:8482200-8483600 Enhancers Liver Liver
10 chr8:8482200-8484800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr8:8482400-8484200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr8:8482400-8484400 Enhancers A549 lung
13 chr8:8482400-8484600 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr8:8482400-8484600 Enhancers NH-A brain
15 chr8:8482400-8485400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr8:8482400-8485800 Enhancers Osteobl bone
17 chr8:8482400-8486000 Enhancers HSMM muscle
18 chr8:8482400-8486200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr8:8482600-8483800 Enhancers Fetal Intestine Large intestine
20 chr8:8482600-8483800 Enhancers HepG2 liver
21 chr8:8482600-8484000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr8:8482600-8484000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr8:8482600-8484000 Flanking Active TSS GM12878-XiMat blood
24 chr8:8482600-8485800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
25 chr8:8482600-8485800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr8:8482600-8485800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr8:8482600-8486000 Enhancers Muscle Satellite Cultured Cells --
28 chr8:8482800-8483800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
29 chr8:8482800-8484000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr8:8482800-8484200 Enhancers Stomach Mucosa stomach
31 chr8:8482800-8484600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr8:8482800-8484600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr8:8482800-8484600 Enhancers Fetal Lung lung
34 chr8:8482800-8485000 Enhancers Primary hematopoietic stem cells short term culture blood
35 chr8:8482800-8485400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
36 chr8:8482800-8485600 Enhancers NHDF-Ad bronchial
37 chr8:8482800-8485800 Enhancers HSMMtube muscle
38 chr8:8483000-8483800 Enhancers Brain Anterior Caudate brain
39 chr8:8483000-8485600 Enhancers Placenta Amnion Placenta Amnion
40 chr8:8483200-8483400 Flanking Active TSS Brain Substantia Nigra brain
41 chr8:8483200-8483400 Bivalent Enhancer Esophagus oesophagus
42 chr8:8483200-8483600 Enhancers Placenta Placenta
43 chr8:8483200-8483600 Flanking Active TSS Hela-S3 cervix
44 chr8:8483200-8483800 Enhancers Primary monocytes fromperipheralblood blood
45 chr8:8483200-8483800 Enhancers Lung lung
46 chr8:8483200-8484200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr8:8483200-8484200 Weak transcription Brain Hippocampus Middle brain
48 chr8:8483200-8484200 Enhancers Fetal Heart heart
49 chr8:8483200-8484200 Enhancers Monocytes-CD14+_RO01746 blood
50 chr8:8483200-8484400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

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