Variant report

Variant rs12675597
Chromosome Location chr8:62493192-62493193
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:62411000-62505800 Weak transcription Brain Angular Gyrus brain
2 chr8:62411200-62493800 Weak transcription Brain Inferior Temporal Lobe brain
3 chr8:62414800-62503400 Weak transcription Fetal Heart heart
4 chr8:62442600-62493200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr8:62449800-62503600 Weak transcription Rectal Smooth Muscle rectum
6 chr8:62456600-62503800 Weak transcription Stomach Mucosa stomach
7 chr8:62457000-62496600 Weak transcription Brain Hippocampus Middle brain
8 chr8:62457000-62503000 Weak transcription HSMMtube muscle
9 chr8:62458000-62497000 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr8:62460200-62495800 Weak transcription Placenta Amnion Placenta Amnion
11 chr8:62464000-62494000 Weak transcription HUVEC blood vessel
12 chr8:62466800-62508600 Weak transcription Pancreas Pancrea
13 chr8:62468600-62549000 Weak transcription Right Ventricle heart
14 chr8:62474800-62493400 Weak transcription HMEC breast
15 chr8:62474800-62496600 Weak transcription Placenta Placenta
16 chr8:62480000-62503600 Weak transcription NHEK skin
17 chr8:62480800-62493200 Weak transcription Primary T cells from cord blood blood
18 chr8:62481000-62494000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr8:62481600-62493400 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr8:62484200-62503600 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr8:62487000-62493800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr8:62487000-62494800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr8:62487400-62494400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr8:62487800-62493200 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr8:62487800-62494400 Weak transcription Colonic Mucosa Colon
26 chr8:62488600-62493600 Weak transcription Fetal Stomach stomach
27 chr8:62488800-62493400 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr8:62489000-62502400 Weak transcription Aorta Aorta
29 chr8:62489000-62505000 Weak transcription Fetal Brain Male brain
30 chr8:62489000-62508200 Weak transcription Left Ventricle heart
31 chr8:62489200-62493800 Weak transcription Ovary ovary
32 chr8:62489200-62496600 Weak transcription NHLF lung
33 chr8:62489200-62505800 Weak transcription Colon Smooth Muscle Colon
34 chr8:62489200-62528800 Weak transcription Stomach Smooth Muscle stomach
35 chr8:62489400-62493400 Weak transcription HSMM muscle
36 chr8:62489400-62493800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr8:62489400-62494000 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr8:62491400-62493200 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr8:62491400-62494200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr8:62491400-62494200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr8:62491600-62493400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
42 chr8:62491600-62493800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
43 chr8:62491600-62494000 Strong transcription Adipose Nuclei Adipose
44 chr8:62491600-62494200 ZNF genes & repeats Fetal Brain Female brain
45 chr8:62491600-62494200 ZNF genes & repeats Fetal Intestine Small intestine
46 chr8:62491800-62494400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr8:62492200-62493400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr8:62492200-62494000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
49 chr8:62492200-62494000 ZNF genes & repeats Brain Germinal Matrix brain
50 chr8:62492200-62494200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --

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