Variant report

Variant	rs12682395
Chromosome Location	chr8:96329223-96329224
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs55755604	0.91[ASN][1000 genomes]
rs7812444	0.82[ASN][1000 genomes]
rs867351	0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429930	chr8:96317910-96454743	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:96327000-96329800	Enhancers	Brain Substantia Nigra	brain
2	chr8:96327200-96330200	Enhancers	Brain Hippocampus Middle	brain
3	chr8:96327400-96330200	Enhancers	Brain Cingulate Gyrus	brain
4	chr8:96328200-96329400	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr8:96328200-96330600	Weak transcription	Pancreas	Pancrea
6	chr8:96328800-96330000	Enhancers	Brain Angular Gyrus	brain
7	chr8:96329000-96330600	Enhancers	Stomach Mucosa	stomach
8	chr8:96329000-96330800	Enhancers	Fetal Intestine Large	intestine
9	chr8:96329200-96330600	Enhancers	Fetal Intestine Small	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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