Variant report

Variant rs12691828
Chromosome Location chr2:133530648-133530649
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:133512400-133539400 Weak transcription Brain Cingulate Gyrus brain
2 chr2:133515800-133532200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr2:133517600-133539800 Weak transcription Brain Substantia Nigra brain
4 chr2:133519800-133539800 Weak transcription Fetal Stomach stomach
5 chr2:133523400-133544400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr2:133524200-133547800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr2:133525400-133531200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr2:133526800-133533200 Weak transcription Fetal Brain Male brain
9 chr2:133527400-133533000 Weak transcription NHLF lung
10 chr2:133527400-133538200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr2:133527600-133536800 Weak transcription Fetal Brain Female brain
12 chr2:133527600-133539400 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr2:133527600-133544200 Weak transcription Left Ventricle heart
14 chr2:133527800-133531800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr2:133528000-133541800 Weak transcription Fetal Muscle Trunk muscle
16 chr2:133529000-133530800 Strong transcription Ovary ovary
17 chr2:133529000-133540000 Weak transcription Brain Anterior Caudate brain
18 chr2:133529000-133540200 Weak transcription Lung lung
19 chr2:133529400-133531400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr2:133529400-133540600 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr2:133529400-133544400 Weak transcription Fetal Intestine Large intestine
22 chr2:133529600-133539400 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr2:133530400-133530800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr2:133530400-133530800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr2:133530400-133530800 Strong transcription Liver Liver
26 chr2:133530400-133530800 ZNF genes & repeats Esophagus oesophagus
27 chr2:133530400-133530800 Enhancers Fetal Intestine Small intestine
28 chr2:133530600-133531000 Strong transcription Brain Hippocampus Middle brain
29 chr2:133530600-133533200 Weak transcription Fetal Lung lung
30 chr2:133530600-133539600 Weak transcription Brain Inferior Temporal Lobe brain

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