Variant report
| Variant | rs12708589 |
|---|---|
| Chromosome Location | chr15:92531229-92531230 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:92498200-92555000 | Weak transcription | Gastric | stomach |
| 2 | chr15:92524400-92533600 | Weak transcription | Psoas Muscle | Psoas |
| 3 | chr15:92524600-92533200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 4 | chr15:92524600-92534000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 5 | chr15:92526200-92533400 | Weak transcription | HSMMtube | muscle |
| 6 | chr15:92526200-92544000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 7 | chr15:92526400-92535600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 8 | chr15:92526400-92535800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 9 | chr15:92527400-92532200 | Weak transcription | Ovary | ovary |
| 10 | chr15:92527400-92551400 | Weak transcription | Aorta | Aorta |
| 11 | chr15:92527800-92533000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 12 | chr15:92529000-92533200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 13 | chr15:92529000-92533600 | Weak transcription | Brain Anterior Caudate | brain |
| 14 | chr15:92529000-92538000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 15 | chr15:92529200-92532000 | Weak transcription | Fetal Heart | heart |
| 16 | chr15:92529200-92533600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 17 | chr15:92529400-92532200 | Weak transcription | Brain Angular Gyrus | brain |
| 18 | chr15:92529400-92532200 | Weak transcription | Brain Substantia Nigra | brain |
| 19 | chr15:92529400-92532400 | Weak transcription | Lung | lung |
| 20 | chr15:92529400-92534000 | Weak transcription | Right Ventricle | heart |
| 21 | chr15:92529600-92532200 | Weak transcription | Left Ventricle | heart |
| 22 | chr15:92529600-92532400 | Weak transcription | Brain Hippocampus Middle | brain |
| 23 | chr15:92529600-92532400 | Weak transcription | Right Atrium | heart |
| 24 | chr15:92529600-92533600 | Weak transcription | Esophagus | oesophagus |
| 25 | chr15:92529600-92535600 | Weak transcription | Spleen | Spleen |
| 26 | chr15:92530600-92531600 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 27 | chr15:92531000-92531600 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 28 | chr15:92531200-92531600 | Enhancers | Monocytes-CD14+_RO01746 | blood |
