The 2.0 version of rSNPBase

Variant report

Variant rs12713376
Chromosome Location chr2:58402420-58402421
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:58349000-58421200 Weak transcription Brain Substantia Nigra brain
2 chr2:58359000-58454000 Weak transcription Stomach Smooth Muscle stomach
3 chr2:58363600-58406800 Weak transcription Brain Hippocampus Middle brain
4 chr2:58365600-58438000 Weak transcription Brain Cingulate Gyrus brain
5 chr2:58368200-58403000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr2:58368200-58417000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr2:58383000-58415600 Weak transcription H9 Cell Line embryonic stem cell
8 chr2:58383200-58415000 Weak transcription Rectal Smooth Muscle rectum
9 chr2:58385000-58421200 Weak transcription Left Ventricle heart
10 chr2:58385200-58424600 Weak transcription Ovary ovary
11 chr2:58388800-58437400 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr2:58389000-58423200 Weak transcription NHLF lung
13 chr2:58389600-58431000 Weak transcription HUVEC blood vessel
14 chr2:58389800-58421000 Weak transcription K562 blood
15 chr2:58390200-58421200 Weak transcription Duodenum Mucosa Duodenum
16 chr2:58391000-58467000 Weak transcription HMEC breast
17 chr2:58392200-58414200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr2:58392600-58408200 Weak transcription A549 lung
19 chr2:58392600-58415600 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr2:58393000-58404000 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr2:58394000-58414800 Weak transcription Hela-S3 cervix
22 chr2:58394600-58407800 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr2:58394800-58405000 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr2:58396400-58438000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr2:58396400-58438000 Weak transcription Pancreas Pancrea
26 chr2:58396800-58415200 Weak transcription Dnd41 blood
27 chr2:58397800-58415200 Weak transcription Liver Liver
28 chr2:58397800-58442600 Weak transcription Brain Anterior Caudate brain
29 chr2:58398000-58415800 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr2:58398000-58437800 Weak transcription Primary B cells from cord blood blood
31 chr2:58398600-58415600 Weak transcription HepG2 liver
32 chr2:58399400-58413400 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr2:58399400-58414600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr2:58399400-58437400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr2:58399600-58405000 Weak transcription H1 Cell Line embryonic stem cell
36 chr2:58399600-58413200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr2:58399800-58421800 Weak transcription Fetal Stomach stomach
38 chr2:58399800-58426000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr2:58400200-58409800 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr2:58400400-58402600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr2:58400400-58403400 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr2:58400400-58407400 Weak transcription Fetal Lung lung
43 chr2:58400400-58408200 Weak transcription Primary hematopoietic stem cells blood
44 chr2:58400400-58409800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr2:58400400-58413400 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr2:58400400-58413600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr2:58400400-58415400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr2:58400400-58437800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr2:58401600-58410000 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr2:58401600-58415600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015