Variant report
| Variant | rs12721425 |
|---|---|
| Chromosome Location | chr12:48368128-48368129 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:48358400-48369800 | Weak transcription | Brain Angular Gyrus | brain |
| 2 | chr12:48358400-48373000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 3 | chr12:48358600-48369400 | Weak transcription | Fetal Kidney | kidney |
| 4 | chr12:48358600-48381400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr12:48359200-48384000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 6 | chr12:48360000-48368200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 7 | chr12:48360200-48369600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 8 | chr12:48362400-48370600 | Weak transcription | HMEC | breast |
| 9 | chr12:48362400-48370800 | Weak transcription | NHEK | skin |
| 10 | chr12:48363000-48368800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 11 | chr12:48363000-48370800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 12 | chr12:48363000-48370800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 13 | chr12:48363200-48370800 | Weak transcription | Fetal Stomach | stomach |
| 14 | chr12:48363400-48368200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 15 | chr12:48363400-48368200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 16 | chr12:48363400-48369000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 17 | chr12:48363400-48370800 | Weak transcription | Fetal Thymus | thymus |
| 18 | chr12:48363400-48374800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 19 | chr12:48363400-48375000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 20 | chr12:48363400-48375000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 21 | chr12:48363400-48383000 | Weak transcription | Spleen | Spleen |
| 22 | chr12:48364000-48370600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 23 | chr12:48364400-48369800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 24 | chr12:48364400-48371600 | Weak transcription | Fetal Muscle Leg | muscle |
| 25 | chr12:48364400-48372600 | Strong transcription | Fetal Intestine Small | intestine |
| 26 | chr12:48364400-48381200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 27 | chr12:48364600-48369800 | Weak transcription | Placenta | Placenta |
| 28 | chr12:48364800-48368200 | Weak transcription | Primary T cells from cord blood | blood |
| 29 | chr12:48365200-48381600 | Weak transcription | Right Atrium | heart |
| 30 | chr12:48365400-48381000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 31 | chr12:48366000-48370400 | Strong transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 32 | chr12:48366200-48370600 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 33 | chr12:48366200-48381200 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 34 | chr12:48366200-48381400 | Strong transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 35 | chr12:48366200-48381600 | Strong transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 36 | chr12:48366600-48368800 | Weak transcription | Thymus | Thymus |
| 37 | chr12:48366600-48375200 | Weak transcription | Gastric | stomach |
| 38 | chr12:48366800-48374800 | Weak transcription | HepG2 | liver |
| 39 | chr12:48367800-48368200 | Strong transcription | Fetal Intestine Large | intestine |
| 40 | chr12:48367800-48369600 | Genic enhancers | Breast Myoepithelial Primary Cells | Breast |
| 41 | chr12:48368000-48369200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
