The 2.0 version of rSNPBase

Variant report

Variant rs12723391
Chromosome Location chr1:214584577-214584578
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214557800-214589000 Weak transcription Rectal Smooth Muscle rectum
2 chr1:214560000-214592000 Weak transcription Hela-S3 cervix
3 chr1:214567000-214587600 Weak transcription HepG2 liver
4 chr1:214572600-214612600 Weak transcription Fetal Intestine Small intestine
5 chr1:214573800-214591000 Weak transcription Placenta Amnion Placenta Amnion
6 chr1:214574600-214588200 Weak transcription Aorta Aorta
7 chr1:214575000-214589400 Weak transcription Colon Smooth Muscle Colon
8 chr1:214575200-214589000 Weak transcription Stomach Smooth Muscle stomach
9 chr1:214575200-214591200 Weak transcription Ovary ovary
10 chr1:214575200-214592000 Weak transcription Placenta Placenta
11 chr1:214575200-214595800 Weak transcription Fetal Kidney kidney
12 chr1:214576800-214589000 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr1:214576800-214612200 Weak transcription Fetal Intestine Large intestine
14 chr1:214577000-214589400 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr1:214577400-214589000 Weak transcription Psoas Muscle Psoas
16 chr1:214577400-214591200 Weak transcription Left Ventricle heart
17 chr1:214577600-214586800 Weak transcription Primary hematopoietic stem cells blood
18 chr1:214578600-214585800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:214578600-214586200 Strong transcription HSMM muscle
20 chr1:214578600-214589000 Weak transcription Right Ventricle heart
21 chr1:214578600-214591200 Weak transcription Esophagus oesophagus
22 chr1:214578600-214591400 Weak transcription Fetal Stomach stomach
23 chr1:214578800-214588200 Weak transcription H9 Cell Line embryonic stem cell
24 chr1:214578800-214589400 Weak transcription NHLF lung
25 chr1:214578800-214592600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr1:214578800-214592800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:214579000-214588800 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr1:214579000-214589400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:214579400-214585600 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr1:214579400-214586200 Strong transcription HMEC breast
31 chr1:214579400-214591200 Weak transcription H1 Cell Line embryonic stem cell
32 chr1:214580400-214588000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:214581400-214584600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:214581400-214584600 Strong transcription Muscle Satellite Cultured Cells --
35 chr1:214581400-214601200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr1:214581800-214585200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:214581800-214586600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:214582000-214585400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr1:214582000-214588800 Strong transcription Osteobl bone
40 chr1:214582200-214585400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr1:214582400-214585600 Strong transcription HUES64 Cell Line embryonic stem cell
42 chr1:214582800-214585600 Strong transcription NHDF-Ad bronchial
43 chr1:214583200-214584600 Strong transcription Duodenum Smooth Muscle Duodenum
44 chr1:214583800-214585400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:214583800-214586200 Strong transcription HUVEC blood vessel
46 chr1:214584000-214584600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr1:214584000-214584800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:214584000-214584800 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:214584000-214584800 ZNF genes & repeats A549 lung
50 chr1:214584000-214585000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015