Variant report

Variant rs12729441
Chromosome Location chr1:180553229-180553230
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180549200-180555600 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:180549400-180554800 Weak transcription Stomach Mucosa stomach
3 chr1:180549800-180553800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr1:180549800-180554800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:180550000-180554000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:180550200-180554000 Weak transcription NHEK skin
7 chr1:180550400-180554800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:180550600-180555800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr1:180550800-180554000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:180550800-180554000 Weak transcription Pancreas Pancrea
11 chr1:180551000-180553600 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr1:180551000-180554000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:180551000-180554000 Weak transcription HMEC breast
14 chr1:180551000-180554600 Weak transcription HSMMtube muscle
15 chr1:180551000-180555800 Weak transcription HSMM muscle
16 chr1:180551200-180553400 Weak transcription Placenta Placenta
17 chr1:180551200-180554000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:180551200-180554000 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr1:180551200-180554200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr1:180551200-180554200 Weak transcription NH-A brain
21 chr1:180551200-180554400 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr1:180551200-180554600 Weak transcription Muscle Satellite Cultured Cells --
23 chr1:180551400-180554000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:180551400-180554200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:180551400-180554800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:180552000-180553400 Weak transcription K562 blood
27 chr1:180552000-180554200 Weak transcription Osteobl bone

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