Variant report

Variant rs12733303
Chromosome Location chr1:84629157-84629158
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84610400-84633400 Weak transcription Fetal Kidney kidney
2 chr1:84611600-84629800 Weak transcription Fetal Stomach stomach
3 chr1:84614000-84633800 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr1:84615800-84634800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
5 chr1:84616200-84635200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
6 chr1:84618800-84630400 Weak transcription Primary B cells from cord blood blood
7 chr1:84619200-84630200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:84622200-84630000 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr1:84622400-84635800 Weak transcription Small Intestine intestine
10 chr1:84623000-84629800 Weak transcription Primary B cells from peripheral blood blood
11 chr1:84623000-84639200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:84623800-84630000 Enhancers Primary T helper cells PMA-I stimulated --
13 chr1:84624000-84629200 Weak transcription Fetal Thymus thymus
14 chr1:84624000-84651800 Weak transcription Thymus Thymus
15 chr1:84624200-84630800 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr1:84624800-84633200 Enhancers Primary T helper naive cells from peripheral blood blood
17 chr1:84625200-84629600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:84625600-84629800 Weak transcription Right Atrium heart
19 chr1:84625600-84635600 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr1:84625800-84634000 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr1:84626000-84630000 Weak transcription Primary hematopoietic stem cells blood
22 chr1:84626400-84630400 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr1:84627200-84631000 Weak transcription HUVEC blood vessel
24 chr1:84627600-84635400 Enhancers Primary T helper cells fromperipheralblood blood
25 chr1:84627800-84629400 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr1:84628800-84629200 Enhancers Fetal Brain Female brain
27 chr1:84628800-84629200 Enhancers Spleen Spleen
28 chr1:84628800-84629400 Enhancers Primary T cells fromperipheralblood blood
29 chr1:84628800-84629400 Enhancers Primary Natural Killer cells fromperipheralblood blood
30 chr1:84628800-84629400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr1:84628800-84629400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
32 chr1:84628800-84629400 Enhancers Brain Angular Gyrus brain
33 chr1:84628800-84629400 Enhancers Brain Cingulate Gyrus brain
34 chr1:84628800-84629400 Enhancers Brain Inferior Temporal Lobe brain
35 chr1:84628800-84629400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
36 chr1:84628800-84629400 Flanking Active TSS Pancreatic Islets Pancreatic Islet
37 chr1:84628800-84629600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:84628800-84629600 Flanking Active TSS Brain Anterior Caudate brain
39 chr1:84628800-84629600 Enhancers Brain Substantia Nigra brain
40 chr1:84628800-84629800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:84628800-84629800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
42 chr1:84628800-84629800 Enhancers Fetal Brain Male brain
43 chr1:84628800-84630400 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:84628800-84630600 Enhancers Primary mononuclear cells fromperipheralblood Blood
45 chr1:84629000-84629200 Active TSS Primary T cells from cord blood blood
46 chr1:84629000-84629200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
47 chr1:84629000-84629200 Enhancers Cortex derived primary cultured neurospheres brain
48 chr1:84629000-84629200 Enhancers Brain Hippocampus Middle brain
49 chr1:84629000-84629200 Enhancers NHLF lung
50 chr1:84629000-84629600 Enhancers Ovary ovary

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