The 2.0 version of rSNPBase

Variant report

Variant rs12741704
Chromosome Location chr1:212961426-212961427
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212895400-212964600 Weak transcription Pancreas Pancrea
2 chr1:212895600-212964600 Weak transcription Gastric stomach
3 chr1:212923600-212963800 Weak transcription Brain Angular Gyrus brain
4 chr1:212923600-212964400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:212923800-212964200 Weak transcription HMEC breast
6 chr1:212926600-212963400 Weak transcription Rectal Smooth Muscle rectum
7 chr1:212927400-212963400 Weak transcription Small Intestine intestine
8 chr1:212927400-212964200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:212936600-212964400 Weak transcription Esophagus oesophagus
10 chr1:212941200-212964200 Weak transcription Right Ventricle heart
11 chr1:212942400-212964200 Weak transcription Aorta Aorta
12 chr1:212942600-212964400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr1:212942800-212964200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:212943200-212964200 Weak transcription Brain Inferior Temporal Lobe brain
15 chr1:212944200-212964400 Weak transcription Fetal Heart heart
16 chr1:212950400-212964200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr1:212951800-212964400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:212952400-212963000 Weak transcription Brain Cingulate Gyrus brain
19 chr1:212952600-212963600 Weak transcription Colonic Mucosa Colon
20 chr1:212953000-212964400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:212953200-212964400 Weak transcription Placenta Amnion Placenta Amnion
22 chr1:212954200-212961600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr1:212954400-212964400 Weak transcription Spleen Spleen
24 chr1:212955000-212961600 Strong transcription HUES48 Cell Line embryonic stem cell
25 chr1:212955000-212962000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr1:212955000-212964200 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr1:212955200-212961600 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr1:212955200-212963000 Weak transcription Brain Germinal Matrix brain
29 chr1:212955600-212961800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr1:212955600-212964200 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr1:212955800-212964400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:212956000-212961800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr1:212956400-212962000 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr1:212956400-212963000 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr1:212956400-212964200 Weak transcription NHLF lung
36 chr1:212956600-212962000 Weak transcription GM12878-XiMat blood
37 chr1:212956600-212963800 Weak transcription NHDF-Ad bronchial
38 chr1:212956600-212964200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:212956600-212964200 Weak transcription NH-A brain
40 chr1:212956600-212964200 Weak transcription Osteobl bone
41 chr1:212956800-212963600 Weak transcription A549 lung
42 chr1:212956800-212964200 Weak transcription Psoas Muscle Psoas
43 chr1:212957200-212963800 Weak transcription HUVEC blood vessel
44 chr1:212957200-212964200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:212957600-212961800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:212957600-212963000 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr1:212957800-212963800 Weak transcription Colon Smooth Muscle Colon
48 chr1:212957800-212964200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:212958200-212963600 Weak transcription Fetal Brain Male brain
50 chr1:212958400-212962800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015