The 2.0 version of rSNPBase

Variant report

Variant rs12744747
Chromosome Location chr1:92048772-92048773
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92036400-92051000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:92038200-92049000 Weak transcription Right Atrium heart
3 chr1:92041800-92051200 Weak transcription Fetal Brain Male brain
4 chr1:92043000-92049000 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr1:92044600-92050000 Weak transcription Lung lung
6 chr1:92045000-92049000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr1:92045400-92051400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:92046000-92055000 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr1:92046200-92049000 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:92047000-92050000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:92047200-92049800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:92047200-92052000 Enhancers Fetal Stomach stomach
13 chr1:92047400-92050600 Enhancers NHDF-Ad bronchial
14 chr1:92047400-92050800 Enhancers NHLF lung
15 chr1:92047600-92050800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:92047600-92051000 Enhancers Ovary ovary
17 chr1:92047800-92049000 Enhancers Muscle Satellite Cultured Cells --
18 chr1:92047800-92049200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:92047800-92049200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:92047800-92049200 Enhancers HSMM muscle
21 chr1:92047800-92049400 Enhancers Rectal Smooth Muscle rectum
22 chr1:92047800-92049400 Enhancers Osteobl bone
23 chr1:92047800-92049600 Enhancers Dnd41 blood
24 chr1:92047800-92049800 Enhancers NH-A brain
25 chr1:92048000-92048800 Enhancers HUVEC blood vessel
26 chr1:92048000-92049200 Enhancers Fetal Lung lung
27 chr1:92048000-92049400 Enhancers Fetal Heart heart
28 chr1:92048000-92049400 Enhancers Fetal Muscle Leg muscle
29 chr1:92048000-92049600 Enhancers NHEK skin
30 chr1:92048000-92049800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:92048000-92051800 Enhancers Colon Smooth Muscle Colon
32 chr1:92048000-92052200 Enhancers Stomach Smooth Muscle stomach
33 chr1:92048200-92048800 Enhancers A549 lung
34 chr1:92048200-92049000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
35 chr1:92048200-92049000 Enhancers Fetal Kidney kidney
36 chr1:92048200-92049000 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr1:92048200-92049200 Weak transcription Left Ventricle heart
38 chr1:92048200-92051000 Weak transcription Aorta Aorta
39 chr1:92048400-92048800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:92048400-92048800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr1:92048400-92048800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr1:92048400-92050800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr1:92048400-92054200 Weak transcription K562 blood
44 chr1:92048600-92048800 Flanking Active TSS Pancreatic Islets Pancreatic Islet
45 chr1:92048600-92049000 Enhancers Liver Liver
46 chr1:92048600-92049200 Enhancers Duodenum Mucosa Duodenum
47 chr1:92048600-92049200 Weak transcription Placenta Placenta
48 chr1:92048600-92049400 Enhancers Adipose Nuclei Adipose
49 chr1:92048600-92050400 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015