Variant report

Variant	rs12747888
Chromosome Location	chr13:79877303-79877304
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10157301	0.89[ASN][1000 genomes]
rs1048535	0.89[ASN][1000 genomes]
rs10494277	0.89[ASN][1000 genomes]
rs10788847	1.00[ASN][1000 genomes]
rs11205086	1.00[ASN][1000 genomes]
rs11576287	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11578927	0.89[ASN][1000 genomes]
rs11582063	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11585409	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11586156	0.89[ASN][1000 genomes]
rs11587012	0.89[ASN][1000 genomes]
rs11587180	0.89[ASN][1000 genomes]
rs12094874	0.89[ASN][1000 genomes]
rs12239774	0.89[ASN][1000 genomes]
rs12725760	0.89[ASN][1000 genomes]
rs12728274	1.00[ASN][1000 genomes]
rs12754243	1.00[ASN][1000 genomes]
rs1412541	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17661905	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1888964	0.89[ASN][1000 genomes]
rs2339381	0.89[ASN][1000 genomes]
rs2879458	0.89[ASN][1000 genomes]
rs34013581	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34384421	0.89[ASN][1000 genomes]
rs34491286	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34565481	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34948054	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35274012	0.89[ASN][1000 genomes]
rs35393920	0.89[ASN][1000 genomes]
rs35982913	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs36012879	0.85[ASN][1000 genomes]
rs41268484	0.89[ASN][1000 genomes]
rs4353097	1.00[ASN][1000 genomes]
rs4539140	0.89[ASN][1000 genomes]
rs4845473	0.89[ASN][1000 genomes]
rs4845474	0.89[ASN][1000 genomes]
rs4845482	0.89[ASN][1000 genomes]
rs55683499	1.00[ASN][1000 genomes]
rs56130300	0.89[ASN][1000 genomes]
rs56180022	0.89[ASN][1000 genomes]
rs61812714	0.89[ASN][1000 genomes]
rs61813925	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7539924	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:79865000-79893200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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