The 2.0 version of rSNPBase

Variant report

Variant rs12751490
Chromosome Location chr1:57019844-57019845
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:57001800-57021800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:57007400-57028400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:57009600-57028000 Weak transcription Fetal Kidney kidney
4 chr1:57011000-57020200 Enhancers Brain Hippocampus Middle brain
5 chr1:57012600-57020000 Enhancers Adipose Nuclei Adipose
6 chr1:57013000-57020000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
7 chr1:57013200-57021000 Enhancers Brain Cingulate Gyrus brain
8 chr1:57014000-57026000 Weak transcription Fetal Intestine Large intestine
9 chr1:57015800-57021200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr1:57016000-57038600 Weak transcription HSMMtube muscle
11 chr1:57016200-57020000 Enhancers iPS-18 Cell Line embryonic stem cell
12 chr1:57016400-57020000 Enhancers HUES64 Cell Line embryonic stem cell
13 chr1:57016600-57022200 Genic enhancers NHDF-Ad bronchial
14 chr1:57016800-57023400 Weak transcription Fetal Intestine Small intestine
15 chr1:57017400-57020800 Weak transcription Spleen Spleen
16 chr1:57017400-57025000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:57017400-57035400 Weak transcription Esophagus oesophagus
18 chr1:57017400-57035400 Weak transcription Fetal Thymus thymus
19 chr1:57017400-57039400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr1:57017600-57025600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:57017800-57020800 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr1:57017800-57020800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:57017800-57023400 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:57017800-57028200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr1:57017800-57028600 Weak transcription Pancreas Pancrea
26 chr1:57017800-57040800 Enhancers Cortex derived primary cultured neurospheres brain
27 chr1:57018000-57020800 Weak transcription Fetal Muscle Trunk muscle
28 chr1:57018400-57020000 Enhancers Left Ventricle heart
29 chr1:57018400-57020400 Strong transcription Fetal Stomach stomach
30 chr1:57018400-57022000 Enhancers Brain Substantia Nigra brain
31 chr1:57018600-57020000 Enhancers Stomach Mucosa stomach
32 chr1:57018600-57020200 Genic enhancers Placenta Placenta
33 chr1:57018600-57022000 Weak transcription Muscle Satellite Cultured Cells --
34 chr1:57018800-57020000 Enhancers Colon Smooth Muscle Colon
35 chr1:57019000-57020000 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
36 chr1:57019200-57020800 Weak transcription H9 Cell Line embryonic stem cell
37 chr1:57019200-57023600 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr1:57019200-57026000 Weak transcription H1 Cell Line embryonic stem cell
39 chr1:57019200-57027800 Weak transcription Fetal Brain Female brain
40 chr1:57019200-57028400 Weak transcription Aorta Aorta
41 chr1:57019200-57030400 Weak transcription HSMM muscle
42 chr1:57019400-57020600 Weak transcription Brain Germinal Matrix brain
43 chr1:57019400-57020800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr1:57019400-57020800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr1:57019400-57020800 Weak transcription Psoas Muscle Psoas
46 chr1:57019400-57020800 Weak transcription Right Atrium heart
47 chr1:57019400-57023200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:57019400-57023400 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr1:57019400-57024000 Weak transcription Fetal Muscle Leg muscle
50 chr1:57019400-57027400 Weak transcription Lung lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015