The 2.0 version of rSNPBase

Variant report

Variant rs12751520
Chromosome Location chr1:93998145-93998146
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93964600-94015200 Weak transcription Fetal Brain Male brain
2 chr1:93965000-94013200 Weak transcription Adipose Nuclei Adipose
3 chr1:93965000-94017400 Weak transcription Stomach Mucosa stomach
4 chr1:93973200-94016800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:93973400-94032000 Weak transcription Esophagus oesophagus
6 chr1:93975400-94006400 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:93984200-94017400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr1:93984800-94016000 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr1:93985200-93998400 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr1:93985200-94012000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr1:93985600-94012000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr1:93985600-94014200 Weak transcription Duodenum Mucosa Duodenum
13 chr1:93985600-94014200 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:93985600-94017600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:93985800-94015200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:93985800-94017800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:93986000-94003800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:93986000-94013600 Weak transcription Hela-S3 cervix
19 chr1:93986000-94017600 Weak transcription NHEK skin
20 chr1:93986200-94004400 Strong transcription iPS-20b Cell Line embryonic stem cell
21 chr1:93986600-94006600 Strong transcription HUES64 Cell Line embryonic stem cell
22 chr1:93987000-94015200 Weak transcription Ovary ovary
23 chr1:93987600-94000400 Weak transcription Rectal Smooth Muscle rectum
24 chr1:93988600-93999000 Weak transcription Psoas Muscle Psoas
25 chr1:93989000-94012200 Weak transcription Dnd41 blood
26 chr1:93990000-94009800 Weak transcription Fetal Kidney kidney
27 chr1:93990800-94003200 Strong transcription iPS-18 Cell Line embryonic stem cell
28 chr1:93991200-94006400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:93991400-94002800 Weak transcription Muscle Satellite Cultured Cells --
30 chr1:93992000-94002800 Strong transcription HUES48 Cell Line embryonic stem cell
31 chr1:93992000-94014200 Weak transcription Pancreas Pancrea
32 chr1:93992000-94018000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:93992200-94013000 Weak transcription HMEC breast
34 chr1:93992200-94013800 Weak transcription Left Ventricle heart
35 chr1:93992200-94017800 Weak transcription Gastric stomach
36 chr1:93992200-94018400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr1:93993400-94014200 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr1:93993800-94003800 Strong transcription HUES6 Cell Line embryonic stem cell
39 chr1:93994000-94012800 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr1:93994200-93998400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr1:93994200-94013200 Weak transcription Placenta Placenta
42 chr1:93994400-94000400 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr1:93994400-94002600 Weak transcription Primary monocytes fromperipheralblood blood
44 chr1:93995000-93999200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:93995000-94045000 Weak transcription ES-WA7 Cell Line embryonic stem cell
46 chr1:93995200-93998800 Strong transcription H1 Cell Line embryonic stem cell
47 chr1:93995600-94000800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:93995600-94018000 Weak transcription Primary T cells from cord blood blood
49 chr1:93995800-93999400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr1:93996000-93999000 Strong transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015