Variant report

Variant rs12755383
Chromosome Location chr1:212604966-212604967
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212591000-212605600 Weak transcription Brain Inferior Temporal Lobe brain
2 chr1:212598400-212605600 Weak transcription Brain Substantia Nigra brain
3 chr1:212598800-212605600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr1:212602800-212605600 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr1:212603400-212605600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:212603400-212606000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:212603800-212605000 Enhancers Brain Hippocampus Middle brain
8 chr1:212603800-212605600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:212603800-212605800 Enhancers Fetal Intestine Large intestine
10 chr1:212604000-212605000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:212604000-212605000 Flanking Active TSS K562 blood
12 chr1:212604000-212605600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:212604000-212605600 Weak transcription Fetal Heart heart
14 chr1:212604000-212605800 Enhancers Fetal Intestine Small intestine
15 chr1:212604200-212605600 Weak transcription Brain Angular Gyrus brain
16 chr1:212604200-212605600 Enhancers HepG2 liver
17 chr1:212604200-212605800 Enhancers Fetal Adrenal Gland Adrenal Gland
18 chr1:212604400-212605000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:212604400-212605600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr1:212604400-212605600 Enhancers iPS-20b Cell Line embryonic stem cell
21 chr1:212604400-212605600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:212604400-212605600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:212604400-212605600 Weak transcription NHDF-Ad bronchial
24 chr1:212604400-212605800 Weak transcription Fetal Stomach stomach
25 chr1:212604400-212605800 Enhancers HUVEC blood vessel
26 chr1:212604400-212606000 Enhancers Small Intestine intestine
27 chr1:212604600-212605000 Enhancers HUES6 Cell Line embryonic stem cell
28 chr1:212604600-212605000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:212604600-212605000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
30 chr1:212604600-212605600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:212604600-212605600 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
32 chr1:212604600-212605600 Enhancers Duodenum Mucosa Duodenum
33 chr1:212604600-212605600 Enhancers GM12878-XiMat blood
34 chr1:212604600-212605800 Enhancers Stomach Mucosa stomach
35 chr1:212604600-212606400 Enhancers Placenta Amnion Placenta Amnion
36 chr1:212604800-212605600 Enhancers HUES48 Cell Line embryonic stem cell
37 chr1:212604800-212605600 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
38 chr1:212604800-212605600 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr1:212604800-212605600 Enhancers Brain Anterior Caudate brain
40 chr1:212604800-212605600 Enhancers Brain Cingulate Gyrus brain
41 chr1:212604800-212605600 Enhancers Rectal Mucosa Donor 29 rectum
42 chr1:212604800-212605800 Weak transcription Primary T cells from cord blood blood
43 chr1:212604800-212605800 Enhancers Primary hematopoietic stem cells blood
44 chr1:212604800-212605800 Enhancers Fetal Muscle Leg muscle
45 chr1:212604800-212605800 Enhancers Placenta Placenta

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