Variant report

Variant	rs12771396
Chromosome Location	chr10:94605531-94605532
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:94448193..94452899-chr10:94604769..94609293,6	K562	blood:
2	chr10:94601204..94605771-chr10:94608144..94610303,4	MCF-7	breast:
3	chr10:94449811..94452513-chr10:94604477..94606269,2	K562	blood:
4	chr10:94604476..94607331-chr10:94608009..94611387,4	K562	blood:

Variant related genes	Relation type
ENSG00000152804	Chromatin interaction
ENSG00000138190	Chromatin interaction

rs_ID	r²[population]
rs11816241	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12415602	0.80[EUR][1000 genomes]
rs1326330	0.80[EUR][1000 genomes]
rs67759966	0.80[EUR][1000 genomes]

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94592200-94605600	Weak transcription	Primary B cells from peripheral blood	blood
2	chr10:94596800-94607800	Weak transcription	HSMMtube	muscle
3	chr10:94598600-94607200	Weak transcription	Primary T cells from cord blood	blood
4	chr10:94599400-94607200	Weak transcription	Osteobl	bone
5	chr10:94599400-94607400	Weak transcription	Spleen	Spleen
6	chr10:94599600-94606600	Weak transcription	Lung	lung
7	chr10:94599600-94607600	Weak transcription	Fetal Muscle Trunk	muscle
8	chr10:94600600-94607800	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr10:94602600-94605600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr10:94602600-94607600	Enhancers	Primary hematopoietic stem cells short term culture	blood
11	chr10:94602800-94605600	Enhancers	Primary hematopoietic stem cells	blood
12	chr10:94602800-94605600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr10:94602800-94607400	Enhancers	Primary monocytes fromperipheralblood	blood
14	chr10:94603000-94607000	Weak transcription	Fetal Intestine Large	intestine
15	chr10:94603000-94607000	Weak transcription	Skeletal Muscle Female	skeletal muscle
16	chr10:94603200-94605800	Weak transcription	HepG2	liver
17	chr10:94603200-94606400	Weak transcription	Hela-S3	cervix
18	chr10:94603200-94607200	Weak transcription	Liver	Liver
19	chr10:94603200-94607400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
20	chr10:94603200-94607400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
21	chr10:94603400-94607200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
22	chr10:94603400-94607200	Weak transcription	A549	lung
23	chr10:94603400-94607400	Weak transcription	Adipose Nuclei	Adipose
24	chr10:94604000-94605800	Enhancers	Duodenum Mucosa	Duodenum
25	chr10:94604000-94606800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
26	chr10:94604200-94607200	Weak transcription	Placenta	Placenta
27	chr10:94604200-94607400	Weak transcription	Fetal Muscle Leg	muscle
28	chr10:94604200-94607400	Weak transcription	Skeletal Muscle Male	skeletal muscle
29	chr10:94604200-94607600	Weak transcription	Brain Hippocampus Middle	brain
30	chr10:94604400-94605800	Strong transcription	HUVEC	blood vessel
31	chr10:94605200-94606800	Strong transcription	K562	blood
32	chr10:94605400-94606000	Flanking Active TSS	Primary B cells from cord blood	blood
33	chr10:94605400-94608000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood

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