The 2.0 version of rSNPBase

Variant report

Variant rs1277301
Chromosome Location chr4:57914507-57914508
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:57898800-57917800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr4:57899200-57914600 Weak transcription Brain Substantia Nigra brain
3 chr4:57899400-57925000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr4:57899600-57942200 Weak transcription Primary hematopoietic stem cells blood
5 chr4:57904800-57922200 Weak transcription Brain Cingulate Gyrus brain
6 chr4:57907000-57914800 Weak transcription Fetal Heart heart
7 chr4:57907400-57916600 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr4:57910400-57914800 Weak transcription Brain Hippocampus Middle brain
9 chr4:57910400-57915000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr4:57910400-57915000 Weak transcription Spleen Spleen
11 chr4:57910400-57917200 Weak transcription Rectal Smooth Muscle rectum
12 chr4:57910400-57921200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr4:57910600-57914800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr4:57911400-57915200 Weak transcription Brain Anterior Caudate brain
15 chr4:57911600-57914600 Weak transcription HUVEC blood vessel
16 chr4:57911600-57917200 Weak transcription Stomach Smooth Muscle stomach
17 chr4:57911600-57917400 Weak transcription Fetal Muscle Leg muscle
18 chr4:57911800-57914600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr4:57911800-57914600 Weak transcription Muscle Satellite Cultured Cells --
20 chr4:57911800-57914800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr4:57911800-57914800 Weak transcription Adipose Nuclei Adipose
22 chr4:57911800-57914800 Weak transcription NHEK skin
23 chr4:57911800-57915000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr4:57911800-57915200 Weak transcription A549 lung
25 chr4:57911800-57919600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr4:57912000-57920200 Weak transcription Aorta Aorta
27 chr4:57912400-57914800 Weak transcription HSMM muscle
28 chr4:57912600-57914600 Weak transcription HMEC breast
29 chr4:57912600-57914800 Weak transcription NHDF-Ad bronchial
30 chr4:57912600-57915000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr4:57912600-57916600 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr4:57912800-57914600 Enhancers Left Ventricle heart
33 chr4:57912800-57915000 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr4:57913000-57914600 Weak transcription Colon Smooth Muscle Colon
35 chr4:57913000-57914800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr4:57913000-57914800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr4:57913000-57915600 Weak transcription Psoas Muscle Psoas
38 chr4:57913000-57921200 Weak transcription Fetal Stomach stomach
39 chr4:57913000-57922000 Weak transcription NHLF lung
40 chr4:57913000-57922600 Weak transcription Ovary ovary
41 chr4:57913200-57914600 Weak transcription Osteobl bone
42 chr4:57913200-57915000 Weak transcription NH-A brain
43 chr4:57913400-57915600 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr4:57913400-57915800 Weak transcription Right Ventricle heart
45 chr4:57913600-57914600 Weak transcription HSMMtube muscle
46 chr4:57913600-57914800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr4:57913600-57915000 Weak transcription Fetal Kidney kidney
48 chr4:57913800-57914600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr4:57914000-57919600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr4:57914200-57915000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015