The 2.0 version of rSNPBase

Variant report

Variant rs12807805
Chromosome Location chr11:34213085-34213086
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34196600-34214000 Weak transcription Stomach Mucosa stomach
2 chr11:34202400-34214600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr11:34203000-34224800 Weak transcription Primary neutrophils fromperipheralblood blood
4 chr11:34203400-34228200 Weak transcription Psoas Muscle Psoas
5 chr11:34206200-34214000 Weak transcription Rectal Smooth Muscle rectum
6 chr11:34206400-34214200 Weak transcription Ovary ovary
7 chr11:34207000-34218000 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr11:34207200-34226000 Weak transcription Gastric stomach
9 chr11:34208200-34213200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr11:34208200-34213600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr11:34208200-34213800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr11:34208200-34235200 Weak transcription Adipose Nuclei Adipose
13 chr11:34208400-34213200 Weak transcription Brain Cingulate Gyrus brain
14 chr11:34208400-34213200 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr11:34208400-34213400 Weak transcription Brain Angular Gyrus brain
16 chr11:34208400-34213600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr11:34208400-34213600 Weak transcription HMEC breast
18 chr11:34208400-34213800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr11:34208400-34214000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr11:34208400-34217200 Weak transcription Left Ventricle heart
21 chr11:34208600-34213200 Weak transcription Stomach Smooth Muscle stomach
22 chr11:34208600-34213400 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr11:34208600-34213400 Weak transcription Brain Anterior Caudate brain
24 chr11:34208600-34213400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr11:34208600-34213400 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr11:34208600-34213400 Weak transcription HSMM muscle
27 chr11:34208600-34213600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr11:34208600-34214000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr11:34208600-34214800 Weak transcription Right Atrium heart
30 chr11:34208800-34213400 Weak transcription Brain Hippocampus Middle brain
31 chr11:34208800-34213800 Weak transcription Right Ventricle heart
32 chr11:34209000-34213400 Weak transcription Fetal Muscle Trunk muscle
33 chr11:34209000-34213600 Weak transcription Fetal Stomach stomach
34 chr11:34210200-34214200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr11:34210400-34213200 Weak transcription Fetal Muscle Leg muscle
36 chr11:34210600-34213800 Weak transcription Brain Germinal Matrix brain
37 chr11:34210600-34214000 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr11:34210600-34214000 Weak transcription H9 Cell Line embryonic stem cell
39 chr11:34210600-34214000 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr11:34210600-34214000 Weak transcription A549 lung
41 chr11:34210600-34214200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr11:34210600-34214600 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr11:34210600-34215600 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr11:34210600-34216000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
45 chr11:34210600-34224800 Weak transcription Primary T cells from cord blood blood
46 chr11:34210600-34226600 Weak transcription Pancreas Pancrea
47 chr11:34210800-34213200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr11:34210800-34213200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr11:34210800-34213200 Weak transcription NH-A brain
50 chr11:34210800-34214000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015