Variant report

Variant	rs12810278
Chromosome Location	chr12:31359125-31359126
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOS	chr12:31358838-31359479	MCF10A-Er-Src	breast:	n/a	n/a
2	E2F4	chr12:31359098-31359242	MCF10A-Er-Src	breast:	n/a	n/a
3	JUND	chr12:31358980-31359145	H1-hESC	embryonic stem cell:	n/a	chr12:31359056-31359067
4	MYC	chr12:31358782-31359364	MCF10A-Er-Src	breast:	n/a	n/a
5	TCF12	chr12:31358807-31359363	ECC-1	luminal epithelium:	n/a	n/a
6	EP300	chr12:31358913-31359208	SK-N-SH_RA	brain:	n/a	n/a
7	FOSL2	chr12:31358804-31359363	SK-N-SH	brain:	n/a	n/a
8	USF2	chr12:31358975-31359283	H1-hESC	embryonic stem cell:	n/a	n/a
9	JUND	chr12:31358758-31359346	HCT-116	colon:	n/a	chr12:31359056-31359067
10	STAT3	chr12:31358808-31359677	MCF10A-Er-Src	breast:	n/a	chr12:31358944-31358951
11	NR3C1	chr12:31358937-31359194	ECC-1	luminal epithelium:	n/a	chr12:31359179-31359188 chr12:31359178-31359185
12	POLR2A	chr12:31358873-31359554	H1-hESC	embryonic stem cell:	n/a	n/a
13	CHD2	chr12:31358885-31359207	H1-hESC	embryonic stem cell:	n/a	n/a
14	STAT3	chr12:31357658-31359345	MCF10A-Er-Src	breast:	n/a	chr12:31358944-31358951
15	USF1	chr12:31358898-31359379	H1-hESC	embryonic stem cell:	n/a	n/a
16	POLR2A	chr12:31358932-31359391	PFSK-1	brain:	n/a	n/a
17	MAX	chr12:31358800-31359351	ECC-1	luminal epithelium:	n/a	n/a
18	NFIC	chr12:31358725-31359374	ECC-1	luminal epithelium:	n/a	n/a
19	JUND	chr12:31358778-31359443	SK-N-SH	brain:	n/a	chr12:31359056-31359067
20	NFIC	chr12:31358758-31359364	SK-N-SH	brain:	n/a	n/a
21	FOSL1	chr12:31358744-31359342	HCT-116	colon:	n/a	n/a
22	FOS	chr12:31358809-31359425	MCF10A-Er-Src	breast:	n/a	n/a
23	TAF1	chr12:31359041-31359338	H1-hESC	embryonic stem cell:	n/a	n/a
24	POLR2A	chr12:31358874-31359588	K562	blood:	n/a	n/a
25	JUND	chr12:31358964-31359150	HepG2	liver:	n/a	chr12:31359056-31359067
26	USF1	chr12:31358932-31359294	H1-hESC	embryonic stem cell:	n/a	n/a
27	FOS	chr12:31358846-31359245	MCF10A-Er-Src	breast:	n/a	n/a
28	CBX3	chr12:31358885-31359398	HCT-116	colon:	n/a	n/a
29	POLR2A	chr12:31359022-31359316	H1-hESC	embryonic stem cell:	n/a	n/a
30	MAFK	chr12:31358923-31359208	H1-hESC	embryonic stem cell:	n/a	n/a
31	POLR2A	chr12:31358796-31359578	MCF10A-Er-Src	breast:	n/a	n/a
32	STAT3	chr12:31358855-31359201	MCF10A-Er-Src	breast:	n/a	chr12:31358944-31358951
33	EP300	chr12:31358834-31359466	ECC-1	luminal epithelium:	n/a	chr12:31359244-31359251
34	BACH1	chr12:31358978-31359188	H1-hESC	embryonic stem cell:	n/a	n/a
35	TCF12	chr12:31358724-31359447	SK-N-SH	brain:	n/a	n/a
36	POLR2A	chr12:31359012-31359356	MCF10A-Er-Src	breast:	n/a	n/a
37	JUND	chr12:31358892-31359291	H1-hESC	embryonic stem cell:	n/a	chr12:31359056-31359067
38	USF1	chr12:31358982-31359304	SK-N-SH_RA	brain:	n/a	n/a
39	NFIC	chr12:31358679-31359412	ECC-1	luminal epithelium:	n/a	n/a
40	CTCF	chr12:31359020-31359170	HMEC	breast:	n/a	n/a
41	NR3C1	chr12:31358945-31359184	ECC-1	luminal epithelium:	n/a	n/a
42	SP1	chr12:31358871-31359329	H1-hESC	embryonic stem cell:	n/a	n/a
43	TEAD4	chr12:31358760-31359351	ECC-1	luminal epithelium:	n/a	n/a
44	MAX	chr12:31358917-31359363	H1-hESC	embryonic stem cell:	n/a	n/a
45	MYC	chr12:31358817-31359426	MCF10A-Er-Src	breast:	n/a	n/a
46	FOS	chr12:31358792-31359429	MCF10A-Er-Src	breast:	n/a	n/a
47	POLR2A	chr12:31359067-31359416	H1-hESC	embryonic stem cell:	n/a	n/a
48	USF1	chr12:31358882-31359304	ECC-1	luminal epithelium:	n/a	n/a
49	STAT3	chr12:31358727-31359667	MCF10A-Er-Src	breast:	n/a	chr12:31358944-31358951
50	FOSL2	chr12:31358954-31359305	MCF-7	breast:	n/a	n/a

Variant related genes	Relation type
ENSG00000177359	TF binding region

Extended variants
information (count: 395 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11051295	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12816652	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12818297	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12819069	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12819651	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12823013	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12825461	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12826616	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12827548	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12830601	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12831069	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs34355982	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36032844	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73089027	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73089047	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:380 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052869	chr12:30951520-31399162	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
2	esv2422447	chr12:30954811-31449815	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
3	nsv1041877	chr12:31009451-31809254	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
4	nsv541440	chr12:31009451-31809254	ZNF genes & repeats Enhancers Strong transcription Weak transcription Genic enhancers Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
5	nsv541441	chr12:31080091-31399162	Strong transcription Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
6	nsv427906	chr12:31095869-31361902	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
7	esv2758303	chr12:31125467-31491104	Active TSS Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
8	esv2759890	chr12:31125467-31491104	Weak transcription Flanking Active TSS Active TSS Strong transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
9	nsv428276	chr12:31125467-31491104	Strong transcription Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
10	nsv430467	chr12:31148662-31410284	Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
11	esv2751043	chr12:31148662-31499671	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
12	esv2751044	chr12:31171028-31406907	Bivalent Enhancer Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
13	esv2751045	chr12:31171028-31410333	Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
14	esv2751046	chr12:31174233-31684733	Bivalent Enhancer Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
15	nsv430469	chr12:31174278-31410284	Bivalent Enhancer Enhancers ZNF genes & repeats Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
16	nsv541442	chr12:31186657-31391898	Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
17	nsv541443	chr12:31186657-31399162	Bivalent/Poised TSS Genic enhancers Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
18	nsv541444	chr12:31191137-31399162	Strong transcription Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
19	esv2751047	chr12:31195272-31410284	Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
20	nsv469195	chr12:31201717-31406907	Strong transcription Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
21	nsv558032	chr12:31201717-31406907	Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
22	nsv515974	chr12:31201717-31452750	Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
23	nsv430470	chr12:31201922-31410833	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
24	esv2751048	chr12:31201922-31414473	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
25	nsv469196	chr12:31210114-31406907	Flanking Active TSS Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
26	nsv469197	chr12:31210114-31406907	Bivalent/Poised TSS Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
27	nsv469198	chr12:31210114-31406907	Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
28	nsv469199	chr12:31210114-31406907	Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
29	nsv469200	chr12:31210114-31406907	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
30	nsv558033	chr12:31210114-31406907	Strong transcription Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
31	nsv818899	chr12:31210114-31406907	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
32	nsv558034	chr12:31210114-31408511	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
33	nsv558035	chr12:31210114-31410821	Strong transcription Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
34	nsv832363	chr12:31210478-31380034	Strong transcription Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
35	nsv430471	chr12:31213735-31414473	Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
36	nsv1045497	chr12:31213735-31458547	ZNF genes & repeats Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
37	nsv558036	chr12:31214179-31406907	Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
38	nsv1049249	chr12:31218687-31402690	Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
39	esv2751049	chr12:31225710-31406907	Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
40	esv2751050	chr12:31225710-31406907	Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
41	esv2751051	chr12:31225710-31406933	Enhancers Active TSS Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
42	esv2751052	chr12:31225710-31410284	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
43	esv2751053	chr12:31225710-31484881	Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
44	esv2754121	chr12:31225710-31493435	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
45	esv2751054	chr12:31225710-31513718	Strong transcription ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
46	esv1823736	chr12:31226731-31359531	Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
47	nsv1051356	chr12:31232958-31395831	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
48	nsv1050560	chr12:31232958-31402690	Weak transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
49	esv2760888	chr12:31232970-31417391	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
50	esv2757495	chr12:31234168-31444218	Weak transcription Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:31355200-31362600	Enhancers	HMEC	breast
2	chr12:31356400-31360800	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr12:31356600-31360400	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr12:31357000-31360400	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr12:31357000-31360600	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr12:31357800-31359400	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr12:31357800-31362000	Enhancers	NHEK	skin
8	chr12:31358000-31359600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr12:31358000-31359600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr12:31358000-31359600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr12:31358000-31360000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr12:31358000-31360600	Enhancers	HUES6 Cell Line	embryonic stem cell
13	chr12:31358000-31361800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr12:31358200-31359600	Enhancers	HSMMtube	muscle
15	chr12:31358200-31360200	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr12:31358200-31362200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr12:31358400-31359200	Enhancers	iPS-20b Cell Line	embryonic stem cell
18	chr12:31358400-31359200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr12:31358600-31359200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
20	chr12:31358800-31359400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
21	chr12:31358800-31359400	Enhancers	Adipose Nuclei	Adipose
22	chr12:31358800-31359600	Enhancers	HSMM	muscle
23	chr12:31358800-31360200	Enhancers	H9 Cell Line	embryonic stem cell
24	chr12:31359000-31359400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr12:31359000-31359400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr12:31359000-31359400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr12:31359000-31359400	Enhancers	Pancreas	Pancrea
28	chr12:31359000-31359400	Enhancers	Small Intestine	intestine
29	chr12:31359000-31359600	Enhancers	H1 Cell Line	embryonic stem cell
30	chr12:31359000-31359600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
31	chr12:31359000-31359600	Enhancers	Fetal Muscle Leg	muscle
32	chr12:31359000-31359800	Enhancers	Esophagus	oesophagus
33	chr12:31359000-31360800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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