Variant report

Variant	rs12879625
Chromosome Location	chr14:84303807-84303808
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11623498	1.00[AMR][1000 genomes]
rs12880749	1.00[AFR][1000 genomes]
rs12887005	1.00[ASN][1000 genomes]
rs35120800	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751287	chr14:84294487-84338247	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv565375	chr14:84299666-84336944	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1054166	chr14:84299761-84338200	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv1036610	chr14:84299761-84338626	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv1051093	chr14:84303380-84338626	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv431019	chr14:84303525-84365447	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84295000-84307600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr14:84303000-84304000	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr14:84303400-84304800	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr14:84303400-84305000	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr14:84303600-84304800	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr14:84303800-84304000	Enhancers	iPS-20b Cell Line	embryonic stem cell
7	chr14:84303800-84307800	Weak transcription	HUES48 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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