Variant report

Variant	rs12881199
Chromosome Location	chr14:105218422-105218423
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	KAP1	chr14:105218358-105219002	HEK293	kidney:	n/a	n/a
2	POLR2A	chr14:105218339-105219765	NB4	blood:	n/a	n/a
3	CTCF	chr14:105218353-105218790	K562	blood:	n/a	chr14:105218540-105218553
4	MAZ	chr14:105218419-105219668	K562	blood:	n/a	chr14:105218562-105218571
5	MAX	chr14:105218325-105219800	K562	blood:	n/a	chr14:105219789-105219799 chr14:105218562-105218571
6	CBX3	chr14:105218261-105219139	K562	blood:	n/a	n/a
7	CTCF	chr14:105218420-105218570	HRE	kidney:	n/a	chr14:105218540-105218553
8	MYC	chr14:105218340-105219653	NB4	blood:	n/a	chr14:105218562-105218571
9	HEY1	chr14:105218415-105219105	K562	blood:	n/a	chr14:105218552-105218567
10	MAX	chr14:105218379-105219663	K562	blood:	n/a	chr14:105218562-105218571
11	MAX	chr14:105218422-105220048	A549	lung:	n/a	chr14:105219910-105219920 chr14:105219789-105219799 chr14:105218562-105218571
12	KAP1	chr14:105218139-105218457	K562	blood:	n/a	n/a
13	CCNT2	chr14:105218411-105218703	K562	blood:	n/a	n/a
14	POLR2A	chr14:105218352-105220489	K562	blood:	n/a	n/a
15	SETDB1	chr14:105218104-105218718	K562	blood:	n/a	n/a
16	E2F6	chr14:105218301-105219680	K562	blood:	n/a	chr14:105219293-105219300 chr14:105219178-105219193 chr14:105219129-105219140 chr14:105219292-105219304 chr14:105219470-105219479 chr14:105219116-105219125 chr14:105219354-105219369 chr14:105219292-105219300 chr14:105219293-105219300 chr14:105219472-105219481 chr14:105219293-105219300
17	CTCF	chr14:105218400-105218550	HMEC	breast:	n/a	n/a
18	MAX	chr14:105218344-105219720	NB4	blood:	n/a	chr14:105218562-105218571
19	JUN	chr14:105218369-105219756	K562	blood:	n/a	chr14:105219471-105219480 chr14:105218882-105218891 chr14:105219383-105219392
20	POLR2A	chr14:105218237-105221156	HL-60	blood:	n/a	n/a
21	RCOR1	chr14:105218399-105219674	K562	blood:	n/a	n/a
22	POLR2A	chr14:105218400-105220387	Hela-S3	cervix:	n/a	n/a
23	CTCF	chr14:105218418-105218652	K562	blood:	n/a	chr14:105218540-105218553
24	BHLHE40	chr14:105218397-105218749	K562	blood:	n/a	chr14:105218547-105218563
25	CTCF	chr14:105218415-105218722	K562	blood:	n/a	chr14:105218540-105218553
26	SETDB1	chr14:105218319-105218989	U2OS	brain:	n/a	n/a
27	GABPA	chr14:105218339-105218638	K562	blood:	n/a	n/a
28	MYC	chr14:105218389-105219706	K562	blood:	n/a	chr14:105218562-105218571
29	POLR2A	chr14:105218309-105220328	HL-60	blood:	n/a	n/a
30	E2F6	chr14:105218392-105218683	K562	blood:	n/a	n/a
31	E2F4	chr14:105218413-105219665	K562	blood:	n/a	chr14:105219293-105219300 chr14:105219178-105219193 chr14:105219292-105219304 chr14:105219470-105219479 chr14:105219116-105219125 chr14:105219129-105219140 chr14:105219354-105219369 chr14:105219292-105219300 chr14:105219293-105219300 chr14:105219472-105219481 chr14:105219293-105219300
32	CTCF	chr14:105218275-105218894	K562	blood:	n/a	chr14:105218540-105218553
33	MYC	chr14:105218389-105218734	K562	blood:	n/a	chr14:105218562-105218571
34	POLR2A	chr14:105218264-105219220	GM12892	blood:	n/a	n/a
35	HMGN3	chr14:105218407-105219823	K562	blood:	n/a	n/a
36	CTCF	chr14:105218360-105218510	GM12864	blood:	n/a	n/a
37	CTCF	chr14:105218420-105218570	HUVEC	blood vessel:	n/a	chr14:105218540-105218553
38	CTCF	chr14:105218387-105218770	K562	blood:	n/a	chr14:105218540-105218553
39	MYC	chr14:105218357-105219724	K562	blood:	n/a	chr14:105218562-105218571
40	SIN3AK20	chr14:105218409-105220595	MCF-7	breast:	n/a	n/a
41	RAD21	chr14:105218416-105218686	K562	blood:	n/a	n/a
42	HCFC1	chr14:105218404-105219687	K562	blood:	n/a	n/a
43	POLR2A	chr14:105218233-105219141	K562	blood:	n/a	n/a
44	MAX	chr14:105218378-105219919	A549	lung:	n/a	chr14:105219789-105219799 chr14:105218562-105218571

No.	Distal block	Cell Line	Cell type
1	chr14:105194869..105200156-chr14:105217139..105221997,10	K562	blood:
2	chr12:94853482..94854264-chr14:105218381..105219284,2	NB4	blood:
3	chr14:105212181..105214544-chr14:105215247..105218575,5	K562	blood:
4	chr14:105214906..105218911-chr14:105291555..105293979,3	K562	blood:
5	chr14:105217901..105222027-chr14:105264438..105269623,6	K562	blood:
6	chr14:105216947..105220630-chr14:105265563..105270028,6	MCF-7	breast:
7	chr14:105145928..105148489-chr14:105216164..105218902,2	MCF-7	breast:
8	chr14:105217283..105220523-chr14:105237983..105243269,6	MCF-7	breast:
9	chr14:105172069..105174780-chr14:105216954..105219752,2	MCF-7	breast:
10	chr14:105218074..105222224-chr14:105239346..105242379,3	MCF-7	breast:
11	chr14:105217632..105222660-chr14:105263642..105269157,6	K562	blood:
12	chr14:105217398..105221846-chr14:105284355..105288810,4	MCF-7	breast:
13	chr14:105209075..105211830-chr14:105217895..105220741,2	K562	blood:

Variant related genes	Relation type
SIVA1	TF binding region
ENSG00000185100	Chromatin interaction
ENSG00000256050	Chromatin interaction
ENSG00000258701	Chromatin interaction
ENSG00000173588	Chromatin interaction
ENSG00000179627	Chromatin interaction
ENSG00000203485	Chromatin interaction
ENSG00000142208	Chromatin interaction

Extended variants
information (count: 59 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10142660	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11844508	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11850889	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12885343	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12885496	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12887774	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12892858	0.94[EUR][1000 genomes]
rs12894569	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12896579	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12897418	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35165446	0.94[EUR][1000 genomes]
rs35455320	0.95[EUR][1000 genomes]
rs35550015	0.94[EUR][1000 genomes]
rs35590716	0.92[EUR][1000 genomes]
rs35956117	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3730346	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4381528	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4983542	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4983545	0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4983547	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs71421880	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:38 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530812	chr14:104775571-105364883	Genic enhancers Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
2	nsv1053591	chr14:105024558-105475931	Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
3	nsv542224	chr14:105024558-105475931	Bivalent Enhancer Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
4	esv2830002	chr14:105078251-105348552	Enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
5	nsv902379	chr14:105086475-105274093	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	60 gene(s)	inside rSNPs	diseases
6	nsv902386	chr14:105092479-105233095	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
7	nsv902387	chr14:105092479-105274093	Flanking Active TSS Genic enhancers Enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	60 gene(s)	inside rSNPs	diseases
8	nsv902388	chr14:105092479-105311249	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
9	nsv902389	chr14:105092479-105366499	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
10	esv1828345	chr14:105100787-105803170	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	165 gene(s)	inside rSNPs	diseases
11	nsv902392	chr14:105105769-105274093	Enhancers Bivalent Enhancer Flanking Active TSS Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
12	nsv902394	chr14:105116232-105274093	Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
13	nsv902396	chr14:105119897-105274093	Transcr. at gene 5' and 3' Active TSS Strong transcription Flanking Active TSS Genic enhancers Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
14	nsv470678	chr14:105126354-105246686	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
15	nsv566052	chr14:105126354-105268228	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
16	nsv470677	chr14:105126354-105348552	Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
17	nsv542225	chr14:105133688-105803170	Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	165 gene(s)	inside rSNPs	diseases
18	nsv566053	chr14:105139894-105268228	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
19	nsv902397	chr14:105139894-105268228	Flanking Active TSS Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
20	nsv517038	chr14:105146579-105311249	Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
21	nsv566057	chr14:105146579-105311249	Weak transcription Genic enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
22	nsv566058	chr14:105148655-105233095	Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
23	nsv902403	chr14:105148655-105233095	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
24	nsv820230	chr14:105148655-105246686	ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
25	nsv566059	chr14:105148655-105268228	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
26	nsv566060	chr14:105148655-105311249	Flanking Active TSS Genic enhancers Enhancers Bivalent Enhancer Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
27	nsv902404	chr14:105148655-105311249	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
28	nsv902405	chr14:105148655-105340643	Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Enhancers Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
29	nsv542226	chr14:105153660-105265857	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
30	nsv456455	chr14:105154105-105259734	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
31	nsv566062	chr14:105154105-105259734	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Weak transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
32	nsv902407	chr14:105154105-105268228	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
33	nsv902408	chr14:105154105-105274093	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
34	nsv902409	chr14:105154105-105311249	Flanking Active TSS Genic enhancers Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
35	nsv566063	chr14:105154105-105312935	Weak transcription Active TSS Enhancers Genic enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
36	nsv542227	chr14:105157572-105803170	Enhancers Flanking Active TSS Genic enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	147 gene(s)	inside rSNPs	diseases
37	nsv902411	chr14:105163532-105268228	Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
38	nsv566069	chr14:105185666-105274538	Bivalent/Poised TSS Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs12881199	SIVA1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:120 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:105204200-105219600	Weak transcription	Fetal Heart	heart
2	chr14:105214600-105218600	Weak transcription	Left Ventricle	heart
3	chr14:105214800-105218600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr14:105215400-105218800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr14:105215800-105218600	Weak transcription	Small Intestine	intestine
6	chr14:105216000-105218600	Weak transcription	Right Atrium	heart
7	chr14:105216400-105218600	Weak transcription	Fetal Kidney	kidney
8	chr14:105216400-105218600	Weak transcription	HSMMtube	muscle
9	chr14:105216600-105218800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr14:105216800-105218600	Weak transcription	Aorta	Aorta
11	chr14:105216800-105218600	Weak transcription	Brain Angular Gyrus	brain
12	chr14:105216800-105218600	Weak transcription	NH-A	brain
13	chr14:105217000-105218600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr14:105217000-105218600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr14:105217000-105218600	Weak transcription	Muscle Satellite Cultured Cells	--
16	chr14:105217000-105218600	Weak transcription	NHDF-Ad	bronchial
17	chr14:105217000-105218600	Weak transcription	NHLF	lung
18	chr14:105217800-105218600	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
19	chr14:105217800-105218600	Enhancers	Gastric	stomach
20	chr14:105218000-105218600	Enhancers	Primary hematopoietic stem cells	blood
21	chr14:105218200-105218600	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
22	chr14:105218200-105218600	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
23	chr14:105218200-105218600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
24	chr14:105218200-105218600	Enhancers	Esophagus	oesophagus
25	chr14:105218200-105218600	Enhancers	Fetal Brain Male	brain
26	chr14:105218200-105218600	ZNF genes & repeats	Fetal Intestine Large	intestine
27	chr14:105218200-105218600	Enhancers	Lung	lung
28	chr14:105218200-105218800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
29	chr14:105218200-105218800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
30	chr14:105218200-105218800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
31	chr14:105218200-105218800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr14:105218200-105218800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr14:105218200-105218800	Flanking Active TSS	Colonic Mucosa	Colon
34	chr14:105218200-105218800	Enhancers	Spleen	Spleen
35	chr14:105218200-105219000	Flanking Active TSS	Dnd41	blood
36	chr14:105218200-105219000	Flanking Active TSS	HepG2	liver
37	chr14:105218200-105219600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
38	chr14:105218200-105220600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
39	chr14:105218400-105218600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
40	chr14:105218400-105218600	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr14:105218400-105218600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr14:105218400-105218600	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
43	chr14:105218400-105218600	Enhancers	Liver	Liver
44	chr14:105218400-105218600	Enhancers	Fetal Lung	lung
45	chr14:105218400-105218600	Enhancers	Fetal Muscle Trunk	muscle
46	chr14:105218400-105218600	Enhancers	Fetal Muscle Leg	muscle
47	chr14:105218400-105218600	Flanking Active TSS	Ovary	ovary
48	chr14:105218400-105218600	Enhancers	Pancreas	Pancrea
49	chr14:105218400-105218600	Enhancers	Psoas Muscle	Psoas
50	chr14:105218400-105218600	Enhancers	Sigmoid Colon	Sigmoid Colon

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