Variant report

Variant	rs12893156
Chromosome Location	chr14:80987259-80987260
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs34806974	0.80[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:80941600-80989200	Weak transcription	Left Ventricle	heart
2	chr14:80951800-81003000	Weak transcription	Psoas Muscle	Psoas
3	chr14:80962200-80997800	Weak transcription	Primary hematopoietic stem cells	blood
4	chr14:80968400-80990400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr14:80971800-80994400	Weak transcription	Primary B cells from cord blood	blood
6	chr14:80978600-81006600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr14:80979600-80991600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
8	chr14:80979600-80993200	Weak transcription	Fetal Muscle Leg	muscle
9	chr14:80979800-80990200	Weak transcription	Brain Germinal Matrix	brain
10	chr14:80980400-80988600	Weak transcription	Brain Cingulate Gyrus	brain
11	chr14:80980400-80993600	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr14:80980600-81001600	Weak transcription	Fetal Lung	lung
13	chr14:80980800-80988600	Weak transcription	Cortex derived primary cultured neurospheres	brain
14	chr14:80981200-80993000	Weak transcription	Ovary	ovary
15	chr14:80981600-80990400	Weak transcription	Gastric	stomach
16	chr14:80981600-80996000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
17	chr14:80981800-80993400	Weak transcription	Primary neutrophils fromperipheralblood	blood
18	chr14:80982200-80987800	Weak transcription	Fetal Thymus	thymus
19	chr14:80982200-80989200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr14:80982200-80989400	Weak transcription	Monocytes-CD14+_RO01746	blood
21	chr14:80982200-80989600	Weak transcription	A549	lung
22	chr14:80982200-80996600	Weak transcription	Primary T cells from cord blood	blood
23	chr14:80982400-80989000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr14:80982400-80990800	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr14:80982800-81002800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr14:80983000-80988200	Weak transcription	Aorta	Aorta
27	chr14:80983000-80994200	Weak transcription	Adipose Nuclei	Adipose
28	chr14:80983000-81001600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr14:80983200-80989200	Weak transcription	HSMM	muscle
30	chr14:80983200-80994000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr14:80983200-80994200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
32	chr14:80984200-80988000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr14:80984400-81000600	Weak transcription	Thymus	Thymus
34	chr14:80985600-80988600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr14:80986200-80988000	Weak transcription	Dnd41	blood

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