Variant report

Variant	rs12894760
Chromosome Location	chr14:68129577-68129578
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr14:68129554-68129714	Hela-S3	cervix:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:68128179..68130667-chr14:68160761..68163198,2	MCF-7	breast:

Variant related genes	Relation type
VTI1B	TF binding region
ENSG00000072042	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs11158689	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902068	chr14:68083133-68204876	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68109000-68130000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr14:68109000-68133200	Weak transcription	Stomach Mucosa	stomach
3	chr14:68111000-68135200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr14:68112000-68129800	Strong transcription	Monocytes-CD14+_RO01746	blood
5	chr14:68112400-68129800	Strong transcription	Primary T cells fromperipheralblood	blood
6	chr14:68112400-68130000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr14:68112400-68130000	Strong transcription	Primary T helper cells fromperipheralblood	blood
8	chr14:68114800-68129800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr14:68115600-68130600	Strong transcription	Fetal Intestine Small	intestine
10	chr14:68115600-68135200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr14:68117000-68139400	Weak transcription	Psoas Muscle	Psoas
12	chr14:68118400-68129800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr14:68119400-68140400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr14:68120800-68135400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr14:68121400-68132600	Weak transcription	Fetal Heart	heart
16	chr14:68123800-68132800	Weak transcription	NHLF	lung
17	chr14:68123800-68139400	Weak transcription	Fetal Brain Male	brain
18	chr14:68124000-68132400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
19	chr14:68124000-68132600	Weak transcription	Muscle Satellite Cultured Cells	--
20	chr14:68124000-68132600	Weak transcription	Brain Angular Gyrus	brain
21	chr14:68124000-68133200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
22	chr14:68124000-68133800	Weak transcription	Fetal Kidney	kidney
23	chr14:68124000-68136400	Weak transcription	Pancreas	Pancrea
24	chr14:68124000-68139600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr14:68124000-68140200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
26	chr14:68124000-68140200	Weak transcription	Right Ventricle	heart
27	chr14:68124200-68129600	Weak transcription	HMEC	breast
28	chr14:68124200-68132400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
29	chr14:68124200-68133400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
30	chr14:68124200-68133400	Weak transcription	Rectal Smooth Muscle	rectum
31	chr14:68124200-68139400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
32	chr14:68124400-68132600	Weak transcription	HSMM	muscle
33	chr14:68124400-68132800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
34	chr14:68124400-68133400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
35	chr14:68124400-68133600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr14:68124400-68133800	Weak transcription	Brain Cingulate Gyrus	brain
37	chr14:68124400-68135400	Weak transcription	Brain Germinal Matrix	brain
38	chr14:68124400-68136600	Weak transcription	Gastric	stomach
39	chr14:68124400-68138000	Weak transcription	Ovary	ovary
40	chr14:68124400-68139400	Weak transcription	Aorta	Aorta
41	chr14:68124400-68139400	Weak transcription	Placenta Amnion	Placenta Amnion
42	chr14:68124400-68139400	Weak transcription	Spleen	Spleen
43	chr14:68124400-68139600	Weak transcription	Colonic Mucosa	Colon
44	chr14:68124400-68140400	Weak transcription	H9 Cell Line	embryonic stem cell
45	chr14:68124400-68140800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
46	chr14:68124600-68132800	Weak transcription	K562	blood
47	chr14:68124800-68138400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
48	chr14:68124800-68139200	Weak transcription	Lung	lung
49	chr14:68125000-68133400	Weak transcription	Brain Inferior Temporal Lobe	brain
50	chr14:68125000-68139600	Weak transcription	HUVEC	blood vessel

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