Variant report
| Variant | rs12901814 |
|---|---|
| Chromosome Location | chr15:52696406-52696407 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:52644600-52730200 | Weak transcription | Esophagus | oesophagus |
| 2 | chr15:52663200-52711400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 3 | chr15:52663400-52708600 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 4 | chr15:52665200-52720600 | Weak transcription | Pancreas | Pancrea |
| 5 | chr15:52668800-52730400 | Weak transcription | Aorta | Aorta |
| 6 | chr15:52673800-52730200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 7 | chr15:52674000-52703800 | Weak transcription | Fetal Brain Male | brain |
| 8 | chr15:52675000-52697400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 9 | chr15:52676000-52705600 | Weak transcription | Fetal Stomach | stomach |
| 10 | chr15:52676200-52696800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 11 | chr15:52676200-52701800 | Weak transcription | Colon Smooth Muscle | Colon |
| 12 | chr15:52676400-52696800 | Weak transcription | Brain Germinal Matrix | brain |
| 13 | chr15:52676400-52696800 | Weak transcription | Dnd41 | blood |
| 14 | chr15:52676400-52697000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 15 | chr15:52676400-52699600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 16 | chr15:52676400-52701000 | Weak transcription | HMEC | breast |
| 17 | chr15:52676400-52709800 | Weak transcription | NHLF | lung |
| 18 | chr15:52676400-52721400 | Weak transcription | Gastric | stomach |
| 19 | chr15:52676600-52698000 | Weak transcription | Fetal Thymus | thymus |
| 20 | chr15:52676600-52701800 | Weak transcription | Right Ventricle | heart |
| 21 | chr15:52676600-52706400 | Weak transcription | Lung | lung |
| 22 | chr15:52676600-52718600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 23 | chr15:52677000-52730000 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 24 | chr15:52679800-52729600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 25 | chr15:52679800-52740000 | Weak transcription | Spleen | Spleen |
| 26 | chr15:52680600-52719800 | Weak transcription | NH-A | brain |
| 27 | chr15:52680800-52716400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 28 | chr15:52680800-52730000 | Weak transcription | Brain Angular Gyrus | brain |
| 29 | chr15:52680800-52740200 | Weak transcription | Thymus | Thymus |
| 30 | chr15:52681000-52696600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 31 | chr15:52681000-52696800 | Weak transcription | Ovary | ovary |
| 32 | chr15:52681000-52706800 | Weak transcription | Brain Substantia Nigra | brain |
| 33 | chr15:52681200-52701000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 34 | chr15:52683800-52696800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 35 | chr15:52684000-52719800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 36 | chr15:52684400-52696600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 37 | chr15:52684400-52696800 | Weak transcription | HSMM | muscle |
| 38 | chr15:52684800-52701000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 39 | chr15:52684800-52719800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 40 | chr15:52684800-52730000 | Weak transcription | Brain Hippocampus Middle | brain |
| 41 | chr15:52685000-52696800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 42 | chr15:52685000-52701200 | Weak transcription | A549 | lung |
| 43 | chr15:52685000-52717000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 44 | chr15:52685200-52696800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 45 | chr15:52685200-52701000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 46 | chr15:52685400-52698800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 47 | chr15:52685400-52706200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 48 | chr15:52685400-52711000 | Weak transcription | NHDF-Ad | bronchial |
| 49 | chr15:52685400-52730000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 50 | chr15:52685600-52708000 | Weak transcription | NHEK | skin |
