Variant report

Variant rs12905693
Chromosome Location chr15:56034107-56034108
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56030400-56034600 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr15:56030600-56034600 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
3 chr15:56031200-56034200 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr15:56031400-56036600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr15:56032200-56034200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
6 chr15:56032400-56034200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
7 chr15:56032600-56034200 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
8 chr15:56032600-56035400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr15:56032600-56036200 Active TSS Fetal Kidney kidney
10 chr15:56033000-56034800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr15:56033200-56034200 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
12 chr15:56033200-56034400 Flanking Bivalent TSS/Enh Colon Smooth Muscle Colon
13 chr15:56033200-56034600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
14 chr15:56033200-56036000 Active TSS Placenta Amnion Placenta Amnion
15 chr15:56033400-56034200 Bivalent/Poised TSS Fetal Brain Female brain
16 chr15:56033400-56034400 Flanking Active TSS Hela-S3 cervix
17 chr15:56033400-56034600 Flanking Bivalent TSS/Enh HUES48 Cell Line embryonic stem cell
18 chr15:56033400-56036200 Active TSS Ovary ovary
19 chr15:56033600-56034200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
20 chr15:56033600-56034200 Bivalent Enhancer Primary T cells fromperipheralblood blood
21 chr15:56033600-56034200 Bivalent Enhancer Primary T helper memory cells from peripheral blood 2 blood
22 chr15:56033600-56034200 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
23 chr15:56033600-56034200 Bivalent Enhancer Fetal Heart heart
24 chr15:56033600-56034200 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
25 chr15:56033600-56034400 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
26 chr15:56033600-56034400 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
27 chr15:56033600-56034400 Flanking Bivalent TSS/Enh Muscle Satellite Cultured Cells --
28 chr15:56033600-56034400 Bivalent Enhancer Liver Liver
29 chr15:56033600-56034400 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
30 chr15:56033600-56034400 Flanking Active TSS HSMM muscle
31 chr15:56033600-56034600 Flanking Bivalent TSS/Enh Primary T cells from cord blood blood
32 chr15:56033600-56034600 Flanking Active TSS Primary hematopoietic stem cells blood
33 chr15:56033600-56034600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
34 chr15:56033600-56034600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
35 chr15:56033600-56034600 Bivalent/Poised TSS Brain Anterior Caudate brain
36 chr15:56033600-56034600 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
37 chr15:56033600-56034600 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
38 chr15:56033600-56034600 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
39 chr15:56033600-56034600 Flanking Bivalent TSS/Enh Fetal Thymus thymus
40 chr15:56033600-56034600 Flanking Bivalent TSS/Enh Rectal Mucosa Donor 31 rectum
41 chr15:56033600-56034600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
42 chr15:56033600-56034600 Flanking Active TSS HUVEC blood vessel
43 chr15:56033600-56034800 Bivalent/Poised TSS Brain Angular Gyrus brain
44 chr15:56033600-56034800 Flanking Bivalent TSS/Enh Brain Inferior Temporal Lobe brain
45 chr15:56033600-56035000 Active TSS Right Atrium heart
46 chr15:56033600-56035600 Bivalent/Poised TSS NHDF-Ad bronchial
47 chr15:56033600-56035800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr15:56033600-56035800 Active TSS Fetal Intestine Large intestine
49 chr15:56033600-56035800 Bivalent/Poised TSS Fetal Intestine Small intestine
50 chr15:56033600-56035800 Active TSS Lung lung

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