The 2.0 version of rSNPBase

Variant report

Variant rs12912096
Chromosome Location chr15:40262848-40262849
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:40227200-40268400 Weak transcription Esophagus oesophagus
2 chr15:40227400-40283400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr15:40227800-40268400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr15:40228200-40323800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr15:40230000-40263000 Strong transcription Fetal Muscle Trunk muscle
6 chr15:40231000-40268400 Strong transcription HUES6 Cell Line embryonic stem cell
7 chr15:40235000-40263000 Strong transcription HUES64 Cell Line embryonic stem cell
8 chr15:40236600-40303000 Weak transcription Small Intestine intestine
9 chr15:40238000-40277800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr15:40238600-40268200 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr15:40238600-40272200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr15:40238800-40273200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr15:40240800-40268000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr15:40241000-40268600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr15:40241200-40272600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr15:40248800-40264400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr15:40249000-40304800 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr15:40250000-40263600 Strong transcription HUES48 Cell Line embryonic stem cell
19 chr15:40250000-40294800 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr15:40250200-40299600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr15:40250800-40265800 Weak transcription K562 blood
22 chr15:40253000-40273200 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr15:40253000-40273800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr15:40253200-40273200 Strong transcription Primary monocytes fromperipheralblood blood
25 chr15:40254000-40268400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr15:40256400-40263400 Strong transcription Primary T cells from cord blood blood
27 chr15:40257000-40263800 Strong transcription Adipose Nuclei Adipose
28 chr15:40257200-40264000 Strong transcription Fetal Lung lung
29 chr15:40257200-40272200 Strong transcription Primary hematopoietic stem cells short term culture blood
30 chr15:40257400-40268600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr15:40257800-40267800 Strong transcription Fetal Adrenal Gland Adrenal Gland
32 chr15:40258200-40268600 Weak transcription Gastric stomach
33 chr15:40260000-40265200 Weak transcription Lung lung
34 chr15:40260200-40265400 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr15:40260200-40265400 Weak transcription Ovary ovary
36 chr15:40260200-40268400 Weak transcription Psoas Muscle Psoas
37 chr15:40260200-40268600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr15:40260200-40268600 Weak transcription Pancreas Pancrea
39 chr15:40260400-40265000 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr15:40260400-40265800 Weak transcription Spleen Spleen
41 chr15:40260400-40268200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr15:40260600-40265000 Weak transcription HSMMtube muscle
43 chr15:40260600-40265200 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr15:40260600-40265600 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr15:40260600-40266000 Weak transcription Thymus Thymus
46 chr15:40260800-40263200 Weak transcription Fetal Intestine Small intestine
47 chr15:40260800-40264000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr15:40260800-40265400 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr15:40260800-40265600 Weak transcription Brain Substantia Nigra brain
50 chr15:40260800-40268400 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015