The 2.0 version of rSNPBase

Variant report

Variant rs12913296
Chromosome Location chr15:40844222-40844223
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:40816800-40845600 Weak transcription Ovary ovary
2 chr15:40819600-40845000 Weak transcription Pancreas Pancrea
3 chr15:40821400-40848000 Weak transcription Brain Anterior Caudate brain
4 chr15:40821800-40856400 Weak transcription Colon Smooth Muscle Colon
5 chr15:40822600-40856400 Weak transcription Small Intestine intestine
6 chr15:40828000-40856600 Weak transcription Placenta Amnion Placenta Amnion
7 chr15:40829200-40845200 Weak transcription Muscle Satellite Cultured Cells --
8 chr15:40829400-40845000 Weak transcription NHLF lung
9 chr15:40829600-40845000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr15:40829600-40845200 Weak transcription Brain Cingulate Gyrus brain
11 chr15:40829800-40845400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr15:40829800-40846000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr15:40831600-40856600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr15:40831800-40845800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr15:40832000-40844800 Weak transcription Aorta Aorta
16 chr15:40832000-40845600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr15:40832000-40845800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr15:40832600-40845200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr15:40833400-40845200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr15:40834600-40845200 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr15:40837800-40845200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr15:40838000-40845200 Genic enhancers Primary B cells from peripheral blood blood
23 chr15:40838000-40848200 Weak transcription Rectal Smooth Muscle rectum
24 chr15:40838000-40856400 Weak transcription A549 lung
25 chr15:40838200-40845800 Weak transcription Brain Germinal Matrix brain
26 chr15:40838200-40846600 Strong transcription Fetal Intestine Small intestine
27 chr15:40838600-40847000 Weak transcription Fetal Brain Male brain
28 chr15:40838600-40852800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr15:40838600-40855600 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr15:40838800-40846200 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr15:40838800-40846600 Strong transcription Fetal Stomach stomach
32 chr15:40839000-40845800 Strong transcription Fetal Adrenal Gland Adrenal Gland
33 chr15:40839000-40847200 Weak transcription Brain Angular Gyrus brain
34 chr15:40839200-40845800 Weak transcription Stomach Mucosa stomach
35 chr15:40839200-40848600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr15:40839200-40849000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr15:40839200-40849000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr15:40839200-40849600 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr15:40839200-40850000 Strong transcription Fetal Thymus thymus
40 chr15:40839400-40846600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr15:40839400-40847800 Weak transcription HUVEC blood vessel
42 chr15:40839400-40849600 Strong transcription HMEC breast
43 chr15:40839400-40850000 Strong transcription Fetal Intestine Large intestine
44 chr15:40839600-40845200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr15:40839600-40845400 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr15:40839600-40847600 Weak transcription NHDF-Ad bronchial
47 chr15:40839600-40849800 Strong transcription Primary T regulatory cells fromperipheralblood blood
48 chr15:40839800-40848200 Weak transcription HepG2 liver
49 chr15:40840000-40848000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr15:40840000-40856400 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015