Variant report

Variant rs12943
Chromosome Location chr6:44246766-44246767
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:44239600-44247600 Enhancers Fetal Brain Male brain
2 chr6:44241200-44252200 Weak transcription Brain Inferior Temporal Lobe brain
3 chr6:44244000-44247000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
4 chr6:44244200-44247800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr6:44244200-44250600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr6:44244400-44251000 Weak transcription Gastric stomach
7 chr6:44244400-44257400 Weak transcription Pancreas Pancrea
8 chr6:44244400-44264800 Weak transcription Right Atrium heart
9 chr6:44244800-44248000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr6:44245000-44246800 Strong transcription Brain Germinal Matrix brain
11 chr6:44245000-44251000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr6:44245200-44250000 Weak transcription Brain Anterior Caudate brain
13 chr6:44245800-44252200 Weak transcription Brain Cingulate Gyrus brain
14 chr6:44246000-44247400 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr6:44246400-44247000 Enhancers Hela-S3 cervix
16 chr6:44246400-44247400 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
17 chr6:44246400-44247600 Weak transcription Fetal Brain Female brain
18 chr6:44246400-44255400 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr6:44246600-44246800 Bivalent Enhancer Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr6:44246600-44247400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr6:44246600-44247400 Bivalent Enhancer NHDF-Ad bronchial

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