Variant report

Variant rs12952625
Chromosome Location chr17:59478644-59478645
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:59473400-59479800 Bivalent Enhancer Primary T cells fromperipheralblood blood
2 chr17:59474200-59479000 Active TSS Aorta Aorta
3 chr17:59474200-59481000 Active TSS NHDF-Ad bronchial
4 chr17:59474400-59479800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
5 chr17:59475000-59479200 Active TSS HSMM muscle
6 chr17:59475000-59480400 Bivalent/Poised TSS Fetal Intestine Small intestine
7 chr17:59475400-59478800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr17:59475400-59479600 Bivalent/Poised TSS Rectal Smooth Muscle rectum
9 chr17:59475800-59479400 Active TSS Osteobl bone
10 chr17:59476200-59478800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr17:59476200-59479000 Active TSS HSMMtube muscle
12 chr17:59476200-59479600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr17:59476400-59479000 Active TSS Ovary ovary
14 chr17:59476400-59479400 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr17:59476600-59480600 Active TSS Right Atrium heart
16 chr17:59476800-59479000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
17 chr17:59476800-59479000 Bivalent/Poised TSS Colonic Mucosa Colon
18 chr17:59476800-59479000 Active TSS Lung lung
19 chr17:59476800-59479200 Active TSS Right Ventricle heart
20 chr17:59476800-59479600 Active TSS Pancreas Pancrea
21 chr17:59477000-59479000 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
22 chr17:59477200-59480400 Bivalent Enhancer Primary B cells from peripheral blood blood
23 chr17:59477200-59482200 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
24 chr17:59477400-59478800 Bivalent/Poised TSS NHEK skin
25 chr17:59477400-59479800 Bivalent/Poised TSS Sigmoid Colon Sigmoid Colon
26 chr17:59477800-59480400 Active TSS Gastric stomach
27 chr17:59477800-59482000 Bivalent/Poised TSS Duodenum Mucosa Duodenum
28 chr17:59478000-59478800 Bivalent Enhancer Primary B cells from cord blood blood
29 chr17:59478000-59478800 Bivalent/Poised TSS Brain Angular Gyrus brain
30 chr17:59478000-59478800 Flanking Bivalent TSS/Enh Stomach Smooth Muscle stomach
31 chr17:59478000-59479000 Bivalent Enhancer Primary hematopoietic stem cells blood
32 chr17:59478000-59479000 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
33 chr17:59478000-59479000 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
34 chr17:59478000-59479200 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr17:59478000-59479200 Bivalent Enhancer Primary T helper memory cells from peripheral blood 2 blood
36 chr17:59478000-59479200 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
37 chr17:59478000-59479400 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
38 chr17:59478000-59479600 Bivalent Enhancer H1 Cell Line embryonic stem cell
39 chr17:59478000-59479800 Bivalent/Poised TSS Psoas Muscle Psoas
40 chr17:59478000-59480000 Bivalent/Poised TSS Brain Anterior Caudate brain
41 chr17:59478000-59485400 Transcr. at gene 5' and 3' Fetal Lung lung
42 chr17:59478000-59488200 Transcr. at gene 5' and 3' NHLF lung
43 chr17:59478200-59478800 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
44 chr17:59478200-59479000 Bivalent Enhancer Primary T killer memory cells from peripheral blood blood
45 chr17:59478200-59479200 Bivalent Enhancer Primary T helper naive cells from peripheral blood blood
46 chr17:59478200-59479200 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
47 chr17:59478200-59479400 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
48 chr17:59478200-59479400 Bivalent/Poised TSS Brain Substantia Nigra brain
49 chr17:59478200-59479400 Bivalent/Poised TSS Small Intestine intestine
50 chr17:59478200-59479400 Bivalent Enhancer Stomach Mucosa stomach

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