Variant report

Variant rs12959619
Chromosome Location chr18:395885-395886
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:389800-400800 Enhancers Fetal Muscle Leg muscle
2 chr18:391400-399200 Weak transcription Lung lung
3 chr18:392000-401200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr18:392400-397200 Enhancers Adipose Nuclei Adipose
5 chr18:392600-396600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
6 chr18:392600-396600 Enhancers Rectal Smooth Muscle rectum
7 chr18:392600-401600 Enhancers Fetal Stomach stomach
8 chr18:392600-401800 Enhancers Fetal Lung lung
9 chr18:392800-397200 Enhancers Colon Smooth Muscle Colon
10 chr18:393200-433000 Weak transcription Fetal Brain Male brain
11 chr18:393600-396200 Enhancers Fetal Heart heart
12 chr18:393600-397200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
13 chr18:393600-397200 Enhancers Pancreas Pancrea
14 chr18:393800-396600 Enhancers Brain Hippocampus Middle brain
15 chr18:393800-396800 Enhancers Duodenum Smooth Muscle Duodenum
16 chr18:393800-396800 Weak transcription Fetal Intestine Large intestine
17 chr18:394000-397200 Enhancers Brain Anterior Caudate brain
18 chr18:394000-397200 Enhancers NHLF lung
19 chr18:394200-396000 Enhancers Brain Substantia Nigra brain
20 chr18:394200-397200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
21 chr18:394400-397000 Enhancers NH-A brain
22 chr18:394600-396200 Enhancers Right Ventricle heart
23 chr18:394600-396400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr18:394800-396200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
25 chr18:394800-396200 Enhancers Left Ventricle heart
26 chr18:394800-396200 Enhancers HSMM muscle
27 chr18:394800-396400 Flanking Active TSS Stomach Smooth Muscle stomach
28 chr18:394800-396600 Enhancers HUVEC blood vessel
29 chr18:394800-397000 Enhancers Cortex derived primary cultured neurospheres brain
30 chr18:394800-397000 Enhancers Placenta Placenta
31 chr18:394800-397600 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr18:395000-396000 Enhancers Brain Germinal Matrix brain
33 chr18:395000-396200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr18:395000-396200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
35 chr18:395000-396800 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr18:395000-397000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr18:395000-397000 Enhancers Gastric stomach
38 chr18:395000-397400 Enhancers Brain Inferior Temporal Lobe brain
39 chr18:395200-396000 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr18:395200-396000 Enhancers Right Atrium heart
41 chr18:395200-396000 Enhancers HSMMtube muscle
42 chr18:395200-396200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr18:395200-396400 Weak transcription Primary monocytes fromperipheralblood blood
44 chr18:395200-397000 Enhancers Esophagus oesophagus
45 chr18:395200-397000 Enhancers Fetal Muscle Trunk muscle
46 chr18:395400-396600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr18:395400-396600 Enhancers NHEK skin
48 chr18:395400-397800 Enhancers Brain Cingulate Gyrus brain
49 chr18:395400-398400 Weak transcription Brain Angular Gyrus brain
50 chr18:395400-398800 Enhancers Fetal Intestine Small intestine

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