Variant report

Variant rs12974674
Chromosome Location chr19:39049848-39049849
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38985200-39081800 Weak transcription Psoas Muscle Psoas
2 chr19:39026000-39052400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:39029000-39051600 Weak transcription H1 Cell Line embryonic stem cell
4 chr19:39030000-39054600 Strong transcription Fetal Muscle Leg muscle
5 chr19:39030200-39055200 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr19:39034600-39051800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr19:39035200-39052600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr19:39035200-39066400 Strong transcription Skeletal Muscle Male skeletal muscle
9 chr19:39035600-39050800 Strong transcription Skeletal Muscle Female skeletal muscle
10 chr19:39035600-39051800 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr19:39035600-39052000 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr19:39035600-39052000 Weak transcription Brain Cingulate Gyrus brain
13 chr19:39035600-39052000 Weak transcription Brain Hippocampus Middle brain
14 chr19:39035800-39051800 Weak transcription Brain Anterior Caudate brain
15 chr19:39036000-39051800 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr19:39036000-39076400 Weak transcription Brain Substantia Nigra brain
17 chr19:39037200-39051800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr19:39039200-39051800 Weak transcription H9 Cell Line embryonic stem cell
19 chr19:39039800-39052200 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr19:39040000-39050000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr19:39040000-39054600 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr19:39041400-39050800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr19:39044800-39051800 Enhancers Primary T cells fromperipheralblood blood
24 chr19:39045000-39055600 Weak transcription Right Atrium heart
25 chr19:39045200-39050400 Weak transcription HSMMtube muscle
26 chr19:39047200-39050400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr19:39047200-39052400 Enhancers Primary Natural Killer cells fromperipheralblood blood
28 chr19:39048200-39050000 Weak transcription NHEK skin
29 chr19:39048200-39050200 Weak transcription A549 lung
30 chr19:39048400-39050000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr19:39048400-39050200 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr19:39048400-39050400 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr19:39048400-39050400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr19:39048400-39050600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr19:39048400-39050600 Enhancers GM12878-XiMat blood
36 chr19:39048400-39052400 Weak transcription Brain Angular Gyrus brain
37 chr19:39049000-39050000 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr19:39049000-39050400 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr19:39049600-39051200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr19:39049600-39053000 Enhancers Primary B cells from peripheral blood blood
41 chr19:39049800-39050600 Enhancers Primary T killer memory cells from peripheral blood blood
42 chr19:39049800-39052000 Enhancers Primary T regulatory cells fromperipheralblood blood
43 chr19:39049800-39052200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr19:39049800-39052800 Enhancers HMEC breast
45 chr19:39049800-39054600 Strong transcription Fetal Muscle Trunk muscle

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