Variant report

Variant	rs12982487
Chromosome Location	chr19:44851762-44851763
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv912110	chr19:44840789-44902190	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv963093	chr19:44850276-44876742	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:44823200-44856200	ZNF genes & repeats	Liver	Liver
2	chr19:44840800-44860000	Weak transcription	NHDF-Ad	bronchial
3	chr19:44844200-44859600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr19:44844200-44859800	Weak transcription	Osteobl	bone
5	chr19:44844800-44853000	Weak transcription	HSMMtube	muscle
6	chr19:44845000-44860000	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr19:44845200-44860000	Weak transcription	HSMM	muscle
8	chr19:44845400-44859800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr19:44847000-44853200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr19:44847400-44855200	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
11	chr19:44847800-44855400	Weak transcription	Right Ventricle	heart
12	chr19:44848000-44851800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr19:44848200-44852200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr19:44848200-44853400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr19:44848200-44854800	Weak transcription	Fetal Brain Male	brain
16	chr19:44849000-44852200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr19:44849000-44852800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr19:44849600-44859800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr19:44850000-44853400	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr19:44850400-44860000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr19:44850400-44860200	Weak transcription	Left Ventricle	heart
22	chr19:44851400-44860400	Weak transcription	Aorta	Aorta
23	chr19:44851600-44852600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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