Variant report

Variant rs12983645
Chromosome Location chr19:44943239-44943240
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44928000-44943600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
2 chr19:44928200-44943400 ZNF genes & repeats Adipose Nuclei Adipose
3 chr19:44928400-44951800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr19:44929200-44945400 ZNF genes & repeats Brain Germinal Matrix brain
5 chr19:44932000-44943400 ZNF genes & repeats Fetal Lung lung
6 chr19:44932000-44953200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
7 chr19:44932200-44943400 ZNF genes & repeats A549 lung
8 chr19:44932200-44943600 ZNF genes & repeats Stomach Smooth Muscle stomach
9 chr19:44934600-44950800 Weak transcription Hela-S3 cervix
10 chr19:44936000-44951400 Weak transcription Fetal Heart heart
11 chr19:44936400-44952000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr19:44937400-44946400 Strong transcription Skeletal Muscle Female skeletal muscle
13 chr19:44937400-44951800 Weak transcription H9 Cell Line embryonic stem cell
14 chr19:44938400-44951800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr19:44938600-44946600 Weak transcription HSMM muscle
16 chr19:44938800-44945800 Weak transcription NHLF lung
17 chr19:44938800-44946400 Weak transcription Fetal Kidney kidney
18 chr19:44938800-44951600 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr19:44939000-44945400 Weak transcription Muscle Satellite Cultured Cells --
20 chr19:44939000-44946000 Weak transcription NH-A brain
21 chr19:44939000-44948400 Weak transcription NHEK skin
22 chr19:44940000-44948200 Weak transcription Osteobl bone
23 chr19:44940000-44950600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr19:44940200-44946200 Weak transcription NHDF-Ad bronchial
25 chr19:44940200-44951200 ZNF genes & repeats Primary hematopoietic stem cells blood
26 chr19:44940600-44951800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr19:44940600-44951800 Weak transcription Fetal Thymus thymus
28 chr19:44940800-44944200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr19:44941000-44943800 Strong transcription Cortex derived primary cultured neurospheres brain
30 chr19:44941000-44946000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr19:44941000-44946000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr19:44941600-44943400 ZNF genes & repeats Psoas Muscle Psoas
33 chr19:44941600-44950400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr19:44941800-44943400 ZNF genes & repeats Ovary ovary
35 chr19:44941800-44943400 Strong transcription Right Ventricle heart
36 chr19:44941800-44944000 Strong transcription Skeletal Muscle Male skeletal muscle
37 chr19:44942000-44943400 ZNF genes & repeats Primary B cells from cord blood blood
38 chr19:44942000-44943400 ZNF genes & repeats Left Ventricle heart
39 chr19:44942000-44943600 ZNF genes & repeats Liver Liver
40 chr19:44942000-44944000 ZNF genes & repeats Aorta Aorta
41 chr19:44942000-44950200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr19:44942000-44950400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr19:44942000-44950800 ZNF genes & repeats Fetal Brain Female brain
44 chr19:44942200-44944400 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr19:44942200-44946600 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr19:44942200-44951800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
47 chr19:44942400-44943400 ZNF genes & repeats Brain Anterior Caudate brain
48 chr19:44942400-44943400 Strong transcription Placenta Amnion Placenta Amnion
49 chr19:44942400-44943800 Strong transcription Fetal Muscle Trunk muscle
50 chr19:44942400-44950400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet

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