Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs12610933	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12980323	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17722703	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17795711	0.84[AFR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2190542	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2190913	0.82[EUR][1000 genomes]
rs2270028	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2270029	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35457488	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4802053	0.82[EUR][1000 genomes]
rs56047751	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs58981361	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6508898	0.82[EUR][1000 genomes]
rs6508899	0.82[EUR][1000 genomes]
rs7245574	0.82[EUR][1000 genomes]
rs7248699	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7248784	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7258574	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs8101868	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8107446	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8108488	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs993983	0.82[EUR][1000 genomes]
rs997104	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv579509	chr19:40004640-40133438	Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
2	esv34120	chr19:40044635-40131820	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:40114800-40121800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr19:40115200-40120400	Weak transcription	Placenta	Placenta

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