The 2.0 version of rSNPBase

Variant report

Variant rs12986716
Chromosome Location chr2:173147550-173147551
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173133600-173149400 Weak transcription Right Atrium heart
2 chr2:173135800-173149200 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr2:173139200-173150000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr2:173142400-173148400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr2:173142800-173151000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr2:173143400-173150600 Enhancers Primary hematopoietic stem cells blood
7 chr2:173143600-173150800 Enhancers Primary hematopoietic stem cells short term culture blood
8 chr2:173143600-173151000 Enhancers Primary monocytes fromperipheralblood blood
9 chr2:173145200-173150200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr2:173145400-173150400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr2:173145400-173154400 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr2:173145800-173147600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
13 chr2:173145800-173147800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr2:173145800-173150200 Enhancers NHEK skin
15 chr2:173145800-173150600 Enhancers HMEC breast
16 chr2:173146000-173150000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr2:173146200-173148200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr2:173146200-173151000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr2:173146400-173151000 Enhancers Monocytes-CD14+_RO01746 blood
20 chr2:173146400-173151000 Enhancers NHDF-Ad bronchial
21 chr2:173146400-173152000 Enhancers HSMM muscle
22 chr2:173146400-173153600 Enhancers HSMMtube muscle
23 chr2:173146400-173154400 Enhancers HUVEC blood vessel
24 chr2:173146600-173148600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr2:173146600-173150000 Enhancers Osteobl bone
26 chr2:173146600-173150400 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr2:173146600-173150600 Enhancers Muscle Satellite Cultured Cells --
28 chr2:173146800-173148400 Enhancers Skeletal Muscle Female skeletal muscle
29 chr2:173146800-173149000 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr2:173146800-173149200 Weak transcription Brain Angular Gyrus brain
31 chr2:173146800-173149200 Enhancers Placenta Amnion Placenta Amnion
32 chr2:173146800-173150600 Enhancers NH-A brain
33 chr2:173146800-173150800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr2:173146800-173150800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr2:173147000-173148000 Weak transcription NHLF lung
36 chr2:173147000-173148200 Weak transcription Fetal Heart heart
37 chr2:173147200-173150800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr2:173147200-173150800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
39 chr2:173147200-173151000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr2:173147200-173153400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
41 chr2:173147200-173153600 Enhancers Fetal Muscle Leg muscle
42 chr2:173147400-173147600 Enhancers Fetal Muscle Trunk muscle
43 chr2:173147400-173148000 Enhancers ES-WA7 Cell Line embryonic stem cell
44 chr2:173147400-173150200 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015