The 2.0 version of rSNPBase

Variant report

Variant rs12988468
Chromosome Location chr2:32889576-32889577
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32853600-32934600 Weak transcription Small Intestine intestine
2 chr2:32853800-32894000 Weak transcription Thymus Thymus
3 chr2:32855000-32913600 Weak transcription HMEC breast
4 chr2:32855200-32896400 Weak transcription NHEK skin
5 chr2:32860600-32932000 Weak transcription Aorta Aorta
6 chr2:32865600-32907400 Weak transcription Rectal Smooth Muscle rectum
7 chr2:32866600-32903400 Weak transcription HUVEC blood vessel
8 chr2:32866800-32907600 Weak transcription Placenta Amnion Placenta Amnion
9 chr2:32868000-32899800 Weak transcription H1 Cell Line embryonic stem cell
10 chr2:32868200-32915200 Weak transcription Brain Angular Gyrus brain
11 chr2:32868400-32897000 Weak transcription Brain Substantia Nigra brain
12 chr2:32868400-32900400 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr2:32868400-32922400 Weak transcription HSMMtube muscle
14 chr2:32868400-32950600 Weak transcription Esophagus oesophagus
15 chr2:32868800-32912400 Weak transcription Brain Germinal Matrix brain
16 chr2:32868800-32980800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr2:32869000-32897000 Weak transcription Fetal Brain Male brain
18 chr2:32869000-32898400 Weak transcription Pancreas Pancrea
19 chr2:32869000-32936200 Weak transcription Brain Hippocampus Middle brain
20 chr2:32869000-32947800 Weak transcription Spleen Spleen
21 chr2:32869200-32894200 Weak transcription Brain Anterior Caudate brain
22 chr2:32869200-32897200 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr2:32869200-32913600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr2:32869400-32905400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr2:32869800-32891800 Weak transcription Colon Smooth Muscle Colon
26 chr2:32869800-32901000 Weak transcription Lung lung
27 chr2:32869800-32964400 Weak transcription Fetal Brain Female brain
28 chr2:32870400-32905600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr2:32871200-32928600 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr2:32873000-32897000 Weak transcription NH-A brain
31 chr2:32874600-32904000 Weak transcription Fetal Thymus thymus
32 chr2:32875000-32904000 Weak transcription Psoas Muscle Psoas
33 chr2:32876200-32904000 Weak transcription GM12878-XiMat blood
34 chr2:32876400-32896400 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr2:32876400-32898600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr2:32876400-32903800 Weak transcription Fetal Kidney kidney
37 chr2:32876400-32904000 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr2:32876400-32980800 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr2:32876600-32900400 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr2:32876800-32898400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr2:32876800-32900000 Weak transcription Hela-S3 cervix
42 chr2:32877000-32897200 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr2:32878000-32902200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr2:32878200-32905600 Weak transcription NHLF lung
45 chr2:32878400-32890400 Weak transcription HSMM muscle
46 chr2:32878400-32897000 Weak transcription NHDF-Ad bronchial
47 chr2:32878400-32900000 Weak transcription K562 blood
48 chr2:32878400-32913400 Weak transcription Muscle Satellite Cultured Cells --
49 chr2:32878400-32936000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr2:32878400-32941000 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015