The 2.0 version of rSNPBase

Variant report

Variant rs13008476
Chromosome Location chr2:32985666-32985667
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32922400-33006000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:32929000-33003600 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr2:32929800-33016800 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr2:32938200-32998000 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr2:32938200-33016200 Weak transcription HUVEC blood vessel
6 chr2:32945000-33028200 Weak transcription Aorta Aorta
7 chr2:32951000-33050000 Weak transcription Rectal Smooth Muscle rectum
8 chr2:32960000-32998000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:32960000-33006000 Weak transcription Colon Smooth Muscle Colon
10 chr2:32969000-33009800 Weak transcription Fetal Thymus thymus
11 chr2:32970400-32993800 Weak transcription Right Ventricle heart
12 chr2:32971000-32998200 Weak transcription Psoas Muscle Psoas
13 chr2:32971200-33003600 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr2:32971400-32997800 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr2:32971800-32986000 Weak transcription Brain Angular Gyrus brain
16 chr2:32975600-32995200 Weak transcription HSMMtube muscle
17 chr2:32976400-32986200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr2:32976400-33006000 Weak transcription NHEK skin
19 chr2:32977800-32985800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr2:32977800-32986600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr2:32977800-32997800 Weak transcription A549 lung
22 chr2:32977800-33006000 Weak transcription Brain Substantia Nigra brain
23 chr2:32978000-32986400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr2:32978000-32988200 Weak transcription HMEC breast
25 chr2:32978000-33003400 Weak transcription NHDF-Ad bronchial
26 chr2:32978200-32994000 Weak transcription HSMM muscle
27 chr2:32978200-32997800 Weak transcription Brain Cingulate Gyrus brain
28 chr2:32978200-33010000 Weak transcription Muscle Satellite Cultured Cells --
29 chr2:32978400-32985800 Weak transcription NH-A brain
30 chr2:32978400-32998600 Weak transcription NHLF lung
31 chr2:32978400-33005400 Weak transcription Lung lung
32 chr2:32978800-33005600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr2:32979000-33004000 Weak transcription Fetal Intestine Small intestine
34 chr2:32980800-32986400 Strong transcription Fetal Muscle Leg muscle
35 chr2:32981000-32986600 Strong transcription Primary T cells from cord blood blood
36 chr2:32981200-32998000 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr2:32981200-32998200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr2:32981200-33004200 Weak transcription H1 Cell Line embryonic stem cell
39 chr2:32982000-32986800 Strong transcription Dnd41 blood
40 chr2:32982000-32993400 Weak transcription Spleen Spleen
41 chr2:32982000-32998000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr2:32982000-33005000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr2:32982000-33006000 Weak transcription Gastric stomach
44 chr2:32982200-32986600 Strong transcription Primary B cells from cord blood blood
45 chr2:32982200-33002800 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr2:32982200-33006000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr2:32982400-32998000 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr2:32982600-32987200 Strong transcription Primary hematopoietic stem cells short term culture blood
49 chr2:32983000-32986000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr2:32983000-32986400 Strong transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015